RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 MYH4Q9Y623 1939 aa-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 RGPD8O14715 1765 aaPredicted RBP-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 RGPD5Q99666 1765 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 LRRC7Q96NW7 1537 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 TEX14Q8IWB6 1497 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 MT1AP04731 61 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 COX6B2Q6YFQ2 88 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 C14orf144Q96I85 54 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 DPY30Q9C005 99 aa-0.83□□□□□ -2.54
LINC00871-203ENST00000556869 ALKQ9UM73 1620 aa-0.84□□□□□ -2.54
LINC00871-203ENST00000556869 HECTD1Q9ULT8 2610 aa-0.84□□□□□ -2.54
LINC00871-203ENST00000556869 CNTLNQ9NXG0 1405 aa-0.84□□□□□ -2.54
LINC00871-203ENST00000556869 EPRSP07814 1512 aaKnown RBP-0.84□□□□□ -2.54
LINC00871-203ENST00000556869 FAT3Q8TDW7 4589 aa-0.84□□□□□ -2.54
LINC00871-203ENST00000556869 DNAH9Q9NYC9 4486 aa-0.85□□□□□ -2.54
LINC00871-203ENST00000556869 FASNP49327 2511 aaKnown RBP-0.85□□□□□ -2.55
LINC00871-203ENST00000556869 GAFA1Q96PS6 74 aa-0.85□□□□□ -2.55
LINC00871-203ENST00000556869 ANKRD50Q9ULJ7 1429 aa-0.85□□□□□ -2.55
LINC00871-203ENST00000556869 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.85□□□□□ -2.55
LINC00871-203ENST00000556869 TEP1Q99973 2627 aaKnown RBP-0.85□□□□□ -2.55
LINC00871-203ENST00000556869 FANCAO15360 1455 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 A0A1B0GUT8 65 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 IQCF6A8MYZ5 107 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 ATP6V1G2-DDX39BF2Z307 99 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 HYDINQ4G0P3 5121 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 KIAA1109Q2LD37 5005 aa-0.86□□□□□ -2.55
LINC00871-203ENST00000556869 AKAP13Q12802 2813 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 REV3LO60673 3130 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 C9orf92A6NGG3 77 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 HMGN2P05204 90 aaKnown RBP-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 RBP2P50120 134 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 PLGLAQ15195 96 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 HIVEP1P15822 2718 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 USP9YO00507 2555 aaPredicted RBP-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 RGPD1P0DJD0 1748 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
LINC00871-203ENST00000556869 ACACAQ13085 2346 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 PKHD1L1Q86WI1 4243 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 SUPT6HQ7KZ85 1726 aaKnown RBP-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 TIAM2Q8IVF5 1701 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 CYB5AP00167 134 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 SMIM11AP58511 58 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 PEA15Q15121 130 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 ACBD7Q8N6N7 88 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 ATP10BO94823 1461 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 NBPF19A0A087WUL8 3843 aa-0.88□□□□□ -2.55
LINC00871-203ENST00000556869 RYR1P21817 5038 aa-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 TNRC18O15417 2968 aaPredicted RBP-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 NCMAPQ5T1S8 102 aa-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 ATP7BP35670 1465 aa-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 MYO18BQ8IUG5 2567 aa-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 CUBNO60494 3623 aa-0.89□□□□□ -2.55
LINC00871-203ENST00000556869 SCN11AQ9UI33 1791 aa-0.9□□□□□ -2.55
LINC00871-203ENST00000556869 TACC2O95359 2948 aa-0.9□□□□□ -2.55
LINC00871-203ENST00000556869 PRO3102Q9H379 93 aa-0.9□□□□□ -2.55
LINC00871-203ENST00000556869 MYO3AQ8NEV4 1616 aa-0.9□□□□□ -2.55
LINC00871-203ENST00000556869 TRANK1O15050 2925 aa-0.91□□□□□ -2.55
LINC00871-203ENST00000556869 MTORP42345 2549 aa-0.91□□□□□ -2.55
LINC00871-203ENST00000556869 M0R143 59 aa-0.91□□□□□ -2.56
LINC00871-203ENST00000556869 WFDC9Q8NEX5 89 aa-0.91□□□□□ -2.56
LINC00871-203ENST00000556869 LYSTQ99698 3801 aa-0.91□□□□□ -2.56
LINC00871-203ENST00000556869 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.91□□□□□ -2.56
LINC00871-203ENST00000556869 VPS13DQ5THJ4 4388 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 DOPEY1Q5JWR5 2465 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 RGPD3A6NKT7 1758 aaPredicted RBP-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 RGPD4Q7Z3J3 1758 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 ITPR3Q14573 2671 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 TRAV21A0A0B4J279 112 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 C3orf79P0CE67 100 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 LINC00158P58513 81 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 POLR1AO95602 1720 aaPredicted RBP-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 UBR1Q8IWV7 1749 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 DNAH3Q8TD57 4116 aa-0.92□□□□□ -2.56
LINC00871-203ENST00000556869 NESP48681 1621 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 USP32Q8NFA0 1604 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 LTN1O94822 1766 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 PRRC2CQ9Y520 2896 aaKnown RBP-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 GYPAP02724 150 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 PLXNC1O60486 1568 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 ANKRD26Q9UPS8 1709 aa-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 EPPK1P58107 5090 aaKnown RBP-0.93□□□□□ -2.56
LINC00871-203ENST00000556869 NEXMIFQ5QGS0 1516 aa-0.94□□□□□ -2.56
LINC00871-203ENST00000556869 NWD1Q149M9 1564 aa-0.94□□□□□ -2.56
LINC00871-203ENST00000556869 PEG3Q9GZU2 1588 aa-0.94□□□□□ -2.56
LINC00871-203ENST00000556869 C20orf78Q9BR46 151 aa-0.94□□□□□ -2.56
LINC00871-203ENST00000556869 ANK3Q12955 4377 aaKnown RBP-0.94□□□□□ -2.56
LINC00871-203ENST00000556869 AKAP12Q02952 1782 aa-0.95□□□□□ -2.56
LINC00871-203ENST00000556869 ABCC10Q5T3U5 1492 aa-0.95□□□□□ -2.56
LINC00871-203ENST00000556869 AKAP9Q99996 3911 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 MYMXA0A1B0GTQ4 84 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 S4R3F8 94 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 DOT1LQ8TEK3 1739 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 MAP3K1Q13233 1512 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 PLIN4Q96Q06 1357 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 MGAM2Q2M2H8 2515 aa-0.96□□□□□ -2.56
LINC00871-203ENST00000556869 FAM186AA6NE01 2351 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 CEP162Q5TB80 1403 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 ANKRD11Q6UB99 2663 aaPredicted RBP-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 DNAH11Q96DT5 4516 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 NDUFB1O75438 58 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms