RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
MARK3-210ENST00000556463 ANGP03950 147 aaKnown RBP5.74□□□□□ -1.49
MARK3-210ENST00000556463 MP68P56378 58 aa5.74□□□□□ -1.49
MARK3-210ENST00000556463 ANK3Q12955 4377 aaKnown RBP5.74□□□□□ -1.49
MARK3-210ENST00000556463 POLQO75417 2590 aa5.74□□□□□ -1.49
MARK3-210ENST00000556463 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 CHD6Q8TD26 2715 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 HIVEP2P31629 2446 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 ERC2-IT1O76042 136 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 IGLV1-51P01701 117 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 IGHV4-30-4P0DP06 118 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 MAPK1IP1LQ8NDC0 245 aa5.73□□□□□ -1.49
MARK3-210ENST00000556463 DOPEY1Q5JWR5 2465 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 HTN3P15516 51 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 PSCAO43653 123 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 COX7BP24311 80 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 Q1T7F1 81 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 WFDC10AQ9H1F0 79 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 CFAP46Q8IYW2 2715 aa5.72□□□□□ -1.49
MARK3-210ENST00000556463 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.49
MARK3-210ENST00000556463 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
MARK3-210ENST00000556463 B9D2Q9BPU9 175 aa5.71□□□□□ -1.5
MARK3-210ENST00000556463 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
MARK3-210ENST00000556463 Q75L30 129 aa5.71□□□□□ -1.5
MARK3-210ENST00000556463 IGKV4-1P06312 121 aa5.7□□□□□ -1.5
MARK3-210ENST00000556463 UNQ6190/PRO20217Q6UXQ8 127 aa5.7□□□□□ -1.5
MARK3-210ENST00000556463 UTP20O75691 2785 aaKnown RBP5.7□□□□□ -1.5
MARK3-210ENST00000556463 Q5VV11 94 aa5.7□□□□□ -1.5
MARK3-210ENST00000556463 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
MARK3-210ENST00000556463 NIPBLQ6KC79 2804 aaeCLIP5.7□□□□□ -1.5
MARK3-210ENST00000556463 CHCHD10Q8WYQ3 142 aaPredicted RBP5.7□□□□□ -1.5
MARK3-210ENST00000556463 FLNCQ14315 2725 aa5.69□□□□□ -1.5
MARK3-210ENST00000556463 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
MARK3-210ENST00000556463 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
MARK3-210ENST00000556463 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 TEX15Q9BXT5 2789 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
MARK3-210ENST00000556463 SPAG11BQ08648 103 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 CENPEQ02224 2701 aa5.68□□□□□ -1.5
MARK3-210ENST00000556463 ATP11AUNQ6ZP68 121 aa5.67□□□□□ -1.5
MARK3-210ENST00000556463 LCA10Q71F78 164 aa5.67□□□□□ -1.5
MARK3-210ENST00000556463 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
MARK3-210ENST00000556463 ELOF1P60002 83 aaKnown RBP5.67□□□□□ -1.5
MARK3-210ENST00000556463 REG3AQ06141 175 aa5.66□□□□□ -1.5
MARK3-210ENST00000556463 PRR34Q9NV39 138 aa5.66□□□□□ -1.5
MARK3-210ENST00000556463 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
MARK3-210ENST00000556463 ACANP16112 2415 aa5.66□□□□□ -1.5
MARK3-210ENST00000556463 LRRK2Q5S007 2527 aa5.66□□□□□ -1.5
MARK3-210ENST00000556463 LCE6AA0A183 80 aa5.65□□□□□ -1.51
MARK3-210ENST00000556463 CYSRT1A8MQ03 144 aa5.64□□□□□ -1.51
MARK3-210ENST00000556463 ABCA12Q86UK0 2595 aa5.64□□□□□ -1.51
MARK3-210ENST00000556463 GCN1Q92616 2671 aaKnown RBP5.64□□□□□ -1.51
MARK3-210ENST00000556463 DEFB4AO15263 64 aa5.63□□□□□ -1.51
MARK3-210ENST00000556463 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
MARK3-210ENST00000556463 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
MARK3-210ENST00000556463 K7EQZ3 153 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 NDUFB1O75438 58 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 DEFB113Q30KQ7 82 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 KRTAP10-9P60411 292 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
MARK3-210ENST00000556463 NF1P21359 2839 aa5.61□□□□□ -1.51
MARK3-210ENST00000556463 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
MARK3-210ENST00000556463 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
MARK3-210ENST00000556463 CHD8Q9HCK8 2581 aa5.61□□□□□ -1.51
MARK3-210ENST00000556463 A0A096LNI7 61 aa5.61□□□□□ -1.51
MARK3-210ENST00000556463 LINC00313P59037 77 aa5.61□□□□□ -1.51
MARK3-210ENST00000556463 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
MARK3-210ENST00000556463 H0Y9P7 68 aa5.6□□□□□ -1.51
MARK3-210ENST00000556463 APCP25054 2843 aa5.6□□□□□ -1.51
MARK3-210ENST00000556463 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
MARK3-210ENST00000556463 RPL37AP61513 92 aaKnown RBP5.59□□□□□ -1.51
MARK3-210ENST00000556463 MOBPQ13875 183 aa5.59□□□□□ -1.51
MARK3-210ENST00000556463 LELP1Q5T871 98 aa5.59□□□□□ -1.51
MARK3-210ENST00000556463 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
MARK3-210ENST00000556463 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.51
MARK3-210ENST00000556463 UBR5O95071 2799 aaPredicted RBP5.59□□□□□ -1.52
MARK3-210ENST00000556463 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.52
MARK3-210ENST00000556463 RPL37AP8A6NKH3 93 aa5.59□□□□□ -1.52
MARK3-210ENST00000556463 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
MARK3-210ENST00000556463 KPRPQ5T749 579 aaPredicted RBP5.58□□□□□ -1.52
MARK3-210ENST00000556463 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
MARK3-210ENST00000556463 LOC101927531A0A1B0GV80 90 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 A0A1B0GW54 56 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 COA5Q86WW8 74 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
MARK3-210ENST00000556463 H0Y9J4 135 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 KRTAP1-1Q07627 177 aa5.57□□□□□ -1.52
MARK3-210ENST00000556463 A6NN06 94 aa5.56□□□□□ -1.52
MARK3-210ENST00000556463 SPINK7P58062 85 aa5.56□□□□□ -1.52
MARK3-210ENST00000556463 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
MARK3-210ENST00000556463 UNC79Q9P2D8 2635 aa5.55□□□□□ -1.52
MARK3-210ENST00000556463 EGFEM1PQ0D2K5 195 aa5.55□□□□□ -1.52
MARK3-210ENST00000556463 Q8NAQ8 132 aa5.55□□□□□ -1.52
MARK3-210ENST00000556463 NOTCH2Q04721 2471 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms