RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ARL14EPLP0DKL9 152 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 HBBP68871 147 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 ATXN8Q156A1 80 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 FAM104BQ5XKR9 115 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 HIST1H4GQ99525 98 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
SMARCE1P3-201ENST00000553649 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV7-3A0A075B6L6 115 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 A0A087WYN8 130 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 A0A087WZ39 114 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 A0A0B4J2C4 111 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 C19orf71A6NCJ1 209 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 ARMS2P0C7Q2 107 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 UBE2D1P51668 147 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 ORMDL2Q53FV1 153 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 SDIM1Q6ZPB5 146 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 C9orf163Q8N9P6 203 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 RBM12B-AS1Q9P1G2 102 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV6-8A0A0A6YYG3 113 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV27A0A0K0K1C4 114 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 A0A1B0GXF2 115 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 MIAQ16674 131 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 C7orf33Q8WU49 177 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TMEM243Q9BU79 118 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 GFRA4Q9GZZ7 299 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 IGKV2-24A0A0C4DH68 120 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 PEX7O00628 323 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CENPWQ5EE01 88 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 LINC00173Q6ZV60 143 aa3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 LINC01549A6NIU2 74 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 SH2D1AO60880 128 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CRIP1P50238 77 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CNBPP62633 177 aaKnown RBP3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 Q6ZVQ6 151 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 Q86TA4 180 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TMEM167BQ9NRX6 74 aa3.48□□□□□ -1.85
SMARCE1P3-201ENST00000553649 USH2AO75445 5202 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 TIMM17BO60830 172 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CKS2P33552 79 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 IFI27P40305 119 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CACNG7P62955 275 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 COX6A2Q02221 97 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 REG3AQ06141 175 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 CIRBPQ14011 172 aaKnown RBP3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 DAND5Q8N907 189 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 PRO1854Q9UHT4 67 aa3.47□□□□□ -1.85
SMARCE1P3-201ENST00000553649 LTAP01374 205 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 CCKP06307 115 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 FCER1GP30273 86 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 C2orf82Q6UX34 121 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 PHF5AQ7RTV0 110 aaKnown RBP3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 RNF185Q96GF1 192 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 PLAC8Q9NZF1 115 aa3.46□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRBV6-1A0A0K0K1D8 114 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 MGPP08493 103 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 COX6CP09669 75 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 MT3P25713 68 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 PLNP26678 52 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 RIGQ13278 110 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 SPANXN1Q5VSR9 72 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 Q6JHZ5 121 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TOMM6Q96B49 74 aa3.45□□□□□ -1.86
SMARCE1P3-201ENST00000553649 IGLV4-60A0A075B6I1 120 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 TEX49A0A1B0GTD5 131 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 M0R378 163 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 UBE2BP63146 152 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 KLKP1Q107X0 134 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 S100A7L2Q5SY68 101 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 SPINK6Q6UWN8 80 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 LCA10Q71F78 164 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 Q8N8P6 123 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
SMARCE1P3-201ENST00000553649 PGLYRP4Q96LB8 373 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms