RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IGLV1-50A0A075B6I6 118 aa7.14□□□□□ -1.27
CKAP4-202ENST00000552828 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
CKAP4-202ENST00000552828 UBE2BP63146 152 aa7.14□□□□□ -1.27
CKAP4-202ENST00000552828 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
CKAP4-202ENST00000552828 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
CKAP4-202ENST00000552828 SND1-IT1Q9HBX3 110 aa7.14□□□□□ -1.27
CKAP4-202ENST00000552828 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
CKAP4-202ENST00000552828 K7ERJ3 54 aa7.13□□□□□ -1.27
CKAP4-202ENST00000552828 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
CKAP4-202ENST00000552828 TSPEAR-AS2P59090 65 aa7.13□□□□□ -1.27
CKAP4-202ENST00000552828 NAA38Q9BRA0 125 aaKnown RBP7.13□□□□□ -1.27
CKAP4-202ENST00000552828 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
CKAP4-202ENST00000552828 F8W1H4 67 aa7.12□□□□□ -1.27
CKAP4-202ENST00000552828 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
CKAP4-202ENST00000552828 MRPL55Q7Z7F7 128 aaKnown RBP7.12□□□□□ -1.27
CKAP4-202ENST00000552828 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
CKAP4-202ENST00000552828 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
CKAP4-202ENST00000552828 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
CKAP4-202ENST00000552828 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
CKAP4-202ENST00000552828 VPS25Q9BRG1 176 aa7.1□□□□□ -1.27
CKAP4-202ENST00000552828 PCP4P48539 62 aa7.09□□□□□ -1.27
CKAP4-202ENST00000552828 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
CKAP4-202ENST00000552828 LINC00167Q96N53 147 aa7.09□□□□□ -1.27
CKAP4-202ENST00000552828 VPREB1P12018 145 aa7.08□□□□□ -1.28
CKAP4-202ENST00000552828 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
CKAP4-202ENST00000552828 A0A0J9YXY3 114 aa7.06□□□□□ -1.28
CKAP4-202ENST00000552828 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
CKAP4-202ENST00000552828 J3QR89 54 aa7.06□□□□□ -1.28
CKAP4-202ENST00000552828 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
CKAP4-202ENST00000552828 TRBV20-1A0A075B6N2 111 aa7.05□□□□□ -1.28
CKAP4-202ENST00000552828 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
CKAP4-202ENST00000552828 TSPAN13O95857 204 aa7.05□□□□□ -1.28
CKAP4-202ENST00000552828 PRR4Q16378 134 aa7.05□□□□□ -1.28
CKAP4-202ENST00000552828 DAND5Q8N907 189 aa7.05□□□□□ -1.28
CKAP4-202ENST00000552828 A0A0B4J2C4 111 aa7.04□□□□□ -1.28
CKAP4-202ENST00000552828 ZNF861PO60384 105 aa7.04□□□□□ -1.28
CKAP4-202ENST00000552828 Q8NDZ9 215 aa7.04□□□□□ -1.28
CKAP4-202ENST00000552828 IGKV2-28A0A075B6P5 120 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 H3BMG7 143 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 M0R378 163 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 IGKV2D-28P01615 120 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 CFC1P0CG37 223 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 PRO1854Q9UHT4 67 aa7.03□□□□□ -1.28
CKAP4-202ENST00000552828 BCE1O60756 84 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 TIMM17BO60830 172 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 ADAMTSL4-AS1Q5T5F5 129 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 SPANXDQ9BXN6 97 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
CKAP4-202ENST00000552828 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
CKAP4-202ENST00000552828 A4D1N5 150 aa7□□□□□ -1.29
CKAP4-202ENST00000552828 NCR3O14931 201 aa7□□□□□ -1.29
CKAP4-202ENST00000552828 RPL28P46779 137 aaKnown RBP7□□□□□ -1.29
CKAP4-202ENST00000552828 GHRHP01286 108 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 IFITM1P13164 125 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 NPC2P61916 151 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 LITAFQ99732 161 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
CKAP4-202ENST00000552828 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 NDUFC2O95298 119 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 UBE2AP49459 152 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 PSMB2P49721 201 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 TMEM126AQ9H061 195 aa6.98□□□□□ -1.29
CKAP4-202ENST00000552828 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
CKAP4-202ENST00000552828 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
CKAP4-202ENST00000552828 A0A087X002 238 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 TRBV10-3A0A0K0K1G6 114 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 PRYO14603 147 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
CKAP4-202ENST00000552828 TCL1BO95988 128 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
CKAP4-202ENST00000552828 FAM19A1Q7Z5A9 133 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.3
CKAP4-202ENST00000552828 SCGB1C2P0DMR2 95 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 COPS9Q8WXC6 57 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
CKAP4-202ENST00000552828 CRYGAP11844 174 aa6.94□□□□□ -1.3
CKAP4-202ENST00000552828 PRLHP81277 87 aa6.94□□□□□ -1.3
CKAP4-202ENST00000552828 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
CKAP4-202ENST00000552828 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
CKAP4-202ENST00000552828 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
CKAP4-202ENST00000552828 SPRR1AP35321 89 aa6.92□□□□□ -1.3
CKAP4-202ENST00000552828 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
CKAP4-202ENST00000552828 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
CKAP4-202ENST00000552828 COX6CP09669 75 aa6.91□□□□□ -1.3
CKAP4-202ENST00000552828 SLC25A20O43772 301 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms