RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SVBPQ8N300 66 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 DIRC1Q969H9 104 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 GEMIN7Q9H840 131 aaKnown RBP2.77□□□□□ -1.97
SCAF11-214ENST00000550893 ERG28Q9UKR5 140 aa2.77□□□□□ -1.97
SCAF11-214ENST00000550893 FLGP20930 4061 aaPredicted RBP2.77□□□□□ -1.97
SCAF11-214ENST00000550893 SNAPINO95295 136 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 RAB5BP61020 215 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 CKS1BP61024 79 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 SEC11AP67812 179 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 CXCL6P80162 114 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 PRLHP81277 87 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 C3orf22Q8N5N4 141 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 TMEM126AQ9H061 195 aa2.76□□□□□ -1.97
SCAF11-214ENST00000550893 IGKV2-28A0A075B6P5 120 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 LINC01549A6NIU2 74 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 IGKV2D-28P01615 120 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 PFN2P35080 140 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 UBE2BP63146 152 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 BAGE3Q86Y29 109 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 IFI27L1Q96BM0 104 aa2.75□□□□□ -1.97
SCAF11-214ENST00000550893 CHCHD1Q96BP2 118 aaKnown RBP2.75□□□□□ -1.97
SCAF11-214ENST00000550893 CHTOPQ9Y3Y2 248 aaKnown RBP2.75□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BKO60814 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 ATP5LO75964 103 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BJP06899 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 SMIM13P0DJ93 91 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BOP23527 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BBP33778 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BDP58876 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BCP62807 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST2H2BEQ16778 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.74□□□□□ -1.97
SCAF11-214ENST00000550893 DAND5Q8N907 189 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BHQ93079 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 PLEKHB2Q96CS7 222 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BNQ99877 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 HIST1H2BMQ99879 126 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 PMCHL2Q9BQD1 86 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 SMCO4Q9NRQ5 59 aa2.74□□□□□ -1.97
SCAF11-214ENST00000550893 IGKV2D-26A0A0A0MRZ7 120 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 A0A0U1RRA0 63 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 G0S2P27469 103 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 TMEM170BQ5T4T1 132 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 RETNLBQ9BQ08 111 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 Q9BRP9 147 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
SCAF11-214ENST00000550893 TRBV10-3A0A0K0K1G6 114 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 H3BRM9 83 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 NDUFA6P56556 154 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 COX17Q14061 63 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 LINC00483Q53H64 154 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 KCNQ1DNQ9H478 68 aa2.72□□□□□ -1.97
SCAF11-214ENST00000550893 NCR3O14931 201 aa2.71□□□□□ -1.98
SCAF11-214ENST00000550893 LEPROTO15243 131 aa2.71□□□□□ -1.98
SCAF11-214ENST00000550893 RPL28P46779 137 aaKnown RBP2.71□□□□□ -1.98
SCAF11-214ENST00000550893 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
SCAF11-214ENST00000550893 COA6Q5JTJ3 125 aaKnown RBP2.71□□□□□ -1.98
SCAF11-214ENST00000550893 LINC01545Q5VT33 79 aa2.71□□□□□ -1.98
SCAF11-214ENST00000550893 NDUFA12Q9UI09 145 aa2.71□□□□□ -1.98
SCAF11-214ENST00000550893 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 J3QQQ9 107 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 HSBP1O75506 76 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 IGLV6-57P01721 117 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 RPL13AP40429 203 aaKnown RBP2.7□□□□□ -1.98
SCAF11-214ENST00000550893 NDUFA5Q16718 116 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 NKAPP1Q8N9T2 125 aa2.7□□□□□ -1.98
SCAF11-214ENST00000550893 E9PLD3 99 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 H0Y8G0 127 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 SYS1-DBNDD2H3BUS1 97 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 LEPROTL1O95214 131 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 TSPAN13O95857 204 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 CRYGAP11844 174 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 FABP4P15090 132 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 FAM19A1Q7Z5A9 133 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 BOD1L2Q8IYS8 172 aa2.69□□□□□ -1.98
SCAF11-214ENST00000550893 A4D1N5 150 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 DPM2O94777 84 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 IGKCP01834 107 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 C3orf79P0CE67 100 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 UBE2AP49459 152 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 LINC00158P58513 81 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 LINC00304Q8N9R0 145 aa2.68□□□□□ -1.98
SCAF11-214ENST00000550893 TRBV10-2A0A0K0K1G8 114 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 PLNP26678 52 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 NPC2P61916 151 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 HERV-K104P63124 156 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 PRR4Q16378 134 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms