RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 LINC00158P58513 81 aa8.11□□□□□ -1.11
CDX2-202ENST00000548877 GAGE10A6NGK3 116 aa8.1□□□□□ -1.11
CDX2-202ENST00000548877 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
CDX2-202ENST00000548877 SPAG11BQ08648 103 aa8.1□□□□□ -1.11
CDX2-202ENST00000548877 KIAA0087Q14695 138 aa8.1□□□□□ -1.11
CDX2-202ENST00000548877 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
CDX2-202ENST00000548877 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
CDX2-202ENST00000548877 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.11
CDX2-202ENST00000548877 K7EP34 96 aa8.08□□□□□ -1.12
CDX2-202ENST00000548877 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
CDX2-202ENST00000548877 SPCS1Q9Y6A9 102 aa8.08□□□□□ -1.12
CDX2-202ENST00000548877 TSPAN13O95857 204 aa8.07□□□□□ -1.12
CDX2-202ENST00000548877 RPL18AQ02543 176 aaKnown RBP8.07□□□□□ -1.12
CDX2-202ENST00000548877 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 TRAV13-2A0A0B4J235 113 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 COX6CP09669 75 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 Q1RN00 199 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 DAND5Q8N907 189 aa8.06□□□□□ -1.12
CDX2-202ENST00000548877 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 TRBV30A0A0K0K1B3 111 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 PFN2P35080 140 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 NPC2P61916 151 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
CDX2-202ENST00000548877 PSMB2P49721 201 aa8.04□□□□□ -1.12
CDX2-202ENST00000548877 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
CDX2-202ENST00000548877 NAA38Q9BRA0 125 aaKnown RBP8.04□□□□□ -1.12
CDX2-202ENST00000548877 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
CDX2-202ENST00000548877 MUC17Q685J3 4493 aa8.03□□□□□ -1.12
CDX2-202ENST00000548877 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
CDX2-202ENST00000548877 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
CDX2-202ENST00000548877 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
CDX2-202ENST00000548877 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
CDX2-202ENST00000548877 NDUFC2O95298 119 aa8.01□□□□□ -1.13
CDX2-202ENST00000548877 H7C2G1 150 aa8□□□□□ -1.13
CDX2-202ENST00000548877 UNQ6190/PRO20217Q6UXQ8 127 aa8□□□□□ -1.13
CDX2-202ENST00000548877 EIF4EBP3O60516 100 aaPredicted RBP7.99□□□□□ -1.13
CDX2-202ENST00000548877 F8W1H4 67 aa7.98□□□□□ -1.13
CDX2-202ENST00000548877 ATXN8Q156A1 80 aa7.98□□□□□ -1.13
CDX2-202ENST00000548877 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
CDX2-202ENST00000548877 ZNF861PO60384 105 aa7.97□□□□□ -1.13
CDX2-202ENST00000548877 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
CDX2-202ENST00000548877 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
CDX2-202ENST00000548877 M0QXV9 152 aa7.96□□□□□ -1.14
CDX2-202ENST00000548877 TRIAP1O43715 76 aa7.96□□□□□ -1.14
CDX2-202ENST00000548877 NDUFC2-KCTD14E9PQ53 114 aa7.95□□□□□ -1.14
CDX2-202ENST00000548877 H3BMG7 143 aa7.95□□□□□ -1.14
CDX2-202ENST00000548877 UBE2BP63146 152 aa7.95□□□□□ -1.14
CDX2-202ENST00000548877 CBY1Q9Y3M2 126 aa7.95□□□□□ -1.14
CDX2-202ENST00000548877 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
CDX2-202ENST00000548877 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
CDX2-202ENST00000548877 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
CDX2-202ENST00000548877 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
CDX2-202ENST00000548877 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
CDX2-202ENST00000548877 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
CDX2-202ENST00000548877 TCL1BO95988 128 aa7.93□□□□□ -1.14
CDX2-202ENST00000548877 GAGE2EQ4V326 116 aa7.93□□□□□ -1.14
CDX2-202ENST00000548877 LINC00337Q8N6G1 96 aa7.93□□□□□ -1.14
CDX2-202ENST00000548877 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
CDX2-202ENST00000548877 GAGE2DQ9UEU5 116 aa7.93□□□□□ -1.14
CDX2-202ENST00000548877 A0A087X002 238 aa7.92□□□□□ -1.14
CDX2-202ENST00000548877 H0YGX0 51 aa7.92□□□□□ -1.14
CDX2-202ENST00000548877 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
CDX2-202ENST00000548877 C9orf129Q5T035 196 aaKnown RBP7.91□□□□□ -1.14
CDX2-202ENST00000548877 LST1O00453 97 aa7.9□□□□□ -1.14
CDX2-202ENST00000548877 SNCGO76070 127 aa7.9□□□□□ -1.14
CDX2-202ENST00000548877 S100A7L2Q5SY68 101 aa7.9□□□□□ -1.14
CDX2-202ENST00000548877 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
CDX2-202ENST00000548877 CRYGAP11844 174 aa7.89□□□□□ -1.15
CDX2-202ENST00000548877 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
CDX2-202ENST00000548877 TRACP01848 142 aa7.88□□□□□ -1.15
CDX2-202ENST00000548877 PRO0461Q9UI25 63 aa7.88□□□□□ -1.15
CDX2-202ENST00000548877 K7ERU9 68 aa7.87□□□□□ -1.15
CDX2-202ENST00000548877 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
CDX2-202ENST00000548877 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
CDX2-202ENST00000548877 A0A1B0GX51 115 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 C9JAW5 83 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 H3BT86 120 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 J3QR89 54 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 M0R378 163 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 SLC25A20O43772 301 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 XAGE1AQ9HD64 81 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 C22orf24Q9Y442 160 aa7.86□□□□□ -1.15
CDX2-202ENST00000548877 NCR3O14931 201 aa7.85□□□□□ -1.15
CDX2-202ENST00000548877 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
CDX2-202ENST00000548877 CLEC2BQ92478 149 aa7.85□□□□□ -1.15
CDX2-202ENST00000548877 DNAL4O96015 105 aa7.84□□□□□ -1.15
CDX2-202ENST00000548877 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
CDX2-202ENST00000548877 ANKRD29Q8N6D5 301 aa7.84□□□□□ -1.15
CDX2-202ENST00000548877 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
CDX2-202ENST00000548877 IGLV7-46A0A075B6I9 117 aa7.83□□□□□ -1.16
CDX2-202ENST00000548877 BCE1O60756 84 aa7.83□□□□□ -1.16
CDX2-202ENST00000548877 VPREB1P12018 145 aa7.83□□□□□ -1.16
CDX2-202ENST00000548877 OCIAD2Q56VL3 154 aa7.83□□□□□ -1.16
CDX2-202ENST00000548877 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
CDX2-202ENST00000548877 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
CDX2-202ENST00000548877 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
CDX2-202ENST00000548877 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
CDX2-202ENST00000548877 TRBV7-6A0A0J9YX20 115 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms