RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 PHF5AQ7RTV0 110 aaKnown RBP8.73□□□□□ -1.01
PDE1B-205ENST00000548855 C15orf56Q8N910 161 aa8.73□□□□□ -1.01
PDE1B-205ENST00000548855 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
PDE1B-205ENST00000548855 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
PDE1B-205ENST00000548855 LINC00208Q96KT6 92 aa8.71□□□□□ -1.01
PDE1B-205ENST00000548855 SETXQ7Z333 2677 aaKnown RBP8.71□□□□□ -1.02
PDE1B-205ENST00000548855 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
PDE1B-205ENST00000548855 FAM168BA1KXE4 195 aa8.71□□□□□ -1.02
PDE1B-205ENST00000548855 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
PDE1B-205ENST00000548855 UBR5O95071 2799 aaPredicted RBP8.7□□□□□ -1.02
PDE1B-205ENST00000548855 DMXL1Q9Y485 3027 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 ST20-AS1Q8NBB2 130 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 NOTCH1P46531 2555 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
PDE1B-205ENST00000548855 LRBAP50851 2863 aa8.69□□□□□ -1.02
PDE1B-205ENST00000548855 Q8NBF4 154 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 ZZEF1O43149 2961 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 A0A1B0GW54 56 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
PDE1B-205ENST00000548855 TACC2O95359 2948 aa8.67□□□□□ -1.02
PDE1B-205ENST00000548855 EPM2AB3EWF7 344 aa8.67□□□□□ -1.02
PDE1B-205ENST00000548855 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
PDE1B-205ENST00000548855 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
PDE1B-205ENST00000548855 RTL8CO15255 209 aa8.66□□□□□ -1.02
PDE1B-205ENST00000548855 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
PDE1B-205ENST00000548855 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
PDE1B-205ENST00000548855 ITPR1Q14643 2758 aa8.65□□□□□ -1.03
PDE1B-205ENST00000548855 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
PDE1B-205ENST00000548855 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
PDE1B-205ENST00000548855 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
PDE1B-205ENST00000548855 WIPF1O43516 503 aa8.63□□□□□ -1.03
PDE1B-205ENST00000548855 MOBPQ13875 183 aa8.62□□□□□ -1.03
PDE1B-205ENST00000548855 SMIM29Q86T20 159 aa8.62□□□□□ -1.03
PDE1B-205ENST00000548855 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
PDE1B-205ENST00000548855 LOC400499M0QZD8 3231 aa8.61□□□□□ -1.03
PDE1B-205ENST00000548855 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
PDE1B-205ENST00000548855 BCE1O60756 84 aa8.61□□□□□ -1.03
PDE1B-205ENST00000548855 H0Y9P7 68 aa8.6□□□□□ -1.03
PDE1B-205ENST00000548855 CRYGAP11844 174 aa8.6□□□□□ -1.03
PDE1B-205ENST00000548855 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
PDE1B-205ENST00000548855 SEC61GP60059 68 aa8.59□□□□□ -1.03
PDE1B-205ENST00000548855 V9GYY9 64 aa8.59□□□□□ -1.03
PDE1B-205ENST00000548855 CFAP47Q6ZTR5 3102 aa8.59□□□□□ -1.03
PDE1B-205ENST00000548855 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
PDE1B-205ENST00000548855 MYO15AQ9UKN7 3530 aa8.58□□□□□ -1.04
PDE1B-205ENST00000548855 USP34Q70CQ2 3546 aa8.57□□□□□ -1.04
PDE1B-205ENST00000548855 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
PDE1B-205ENST00000548855 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
PDE1B-205ENST00000548855 SVIPQ8NHG7 77 aa8.56□□□□□ -1.04
PDE1B-205ENST00000548855 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
PDE1B-205ENST00000548855 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
PDE1B-205ENST00000548855 UTP20O75691 2785 aaKnown RBP8.55□□□□□ -1.04
PDE1B-205ENST00000548855 Q8N377 158 aa8.55□□□□□ -1.04
PDE1B-205ENST00000548855 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
PDE1B-205ENST00000548855 APLNQ9ULZ1 77 aa8.54□□□□□ -1.04
PDE1B-205ENST00000548855 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
PDE1B-205ENST00000548855 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
PDE1B-205ENST00000548855 hDV103S1A0JD37 113 aa8.51□□□□□ -1.05
PDE1B-205ENST00000548855 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
PDE1B-205ENST00000548855 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
PDE1B-205ENST00000548855 RETNLBQ9BQ08 111 aa8.51□□□□□ -1.05
PDE1B-205ENST00000548855 A0A087WTM6 91 aa8.5□□□□□ -1.05
PDE1B-205ENST00000548855 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
PDE1B-205ENST00000548855 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
PDE1B-205ENST00000548855 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
PDE1B-205ENST00000548855 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
PDE1B-205ENST00000548855 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
PDE1B-205ENST00000548855 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
PDE1B-205ENST00000548855 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
PDE1B-205ENST00000548855 NBEAL1Q6ZS30 2694 aa8.47□□□□□ -1.05
PDE1B-205ENST00000548855 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
PDE1B-205ENST00000548855 PRR15LQ9BU68 103 aa8.46□□□□□ -1.05
PDE1B-205ENST00000548855 A6NED7 52 aa8.46□□□□□ -1.05
PDE1B-205ENST00000548855 K7EQZ3 153 aa8.46□□□□□ -1.05
PDE1B-205ENST00000548855 ERC2-IT1O76042 136 aa8.46□□□□□ -1.06
PDE1B-205ENST00000548855 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
PDE1B-205ENST00000548855 APCP25054 2843 aa8.44□□□□□ -1.06
PDE1B-205ENST00000548855 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
PDE1B-205ENST00000548855 OBSCN-AS1Q96MR7 158 aa8.43□□□□□ -1.06
PDE1B-205ENST00000548855 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
PDE1B-205ENST00000548855 A8MWP4 228 aa8.42□□□□□ -1.06
PDE1B-205ENST00000548855 NSD1Q96L73 2696 aaPredicted RBP8.42□□□□□ -1.06
PDE1B-205ENST00000548855 ZNF861PO60384 105 aa8.42□□□□□ -1.06
PDE1B-205ENST00000548855 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
PDE1B-205ENST00000548855 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
PDE1B-205ENST00000548855 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
PDE1B-205ENST00000548855 HRNRQ86YZ3 2850 aaPredicted RBP8.39□□□□□ -1.07
PDE1B-205ENST00000548855 H3BPC8 53 aa8.39□□□□□ -1.07
PDE1B-205ENST00000548855 Q8NDZ9 215 aa8.39□□□□□ -1.07
PDE1B-205ENST00000548855 RPS28P62857 69 aaKnown RBP8.39□□□□□ -1.07
PDE1B-205ENST00000548855 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
PDE1B-205ENST00000548855 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
PDE1B-205ENST00000548855 IGKV2-30P06310 120 aa8.38□□□□□ -1.07
PDE1B-205ENST00000548855 PSPHP1O15172 72 aa8.38□□□□□ -1.07
PDE1B-205ENST00000548855 IGLV5-48A0A075B6I7 105 aa8.37□□□□□ -1.07
PDE1B-205ENST00000548855 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms