RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DOCK11Q5JSL3 2073 aa1.71□□□□□ -2.14
SCAF11-210ENST00000547654 TNXBP22105 4242 aa1.71□□□□□ -2.14
SCAF11-210ENST00000547654 M0R143 59 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 SSSCA1O60232 199 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 CCL8P80075 99 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 C5orf38Q86SI9 138 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 DSCR8Q96T75 97 aa1.7□□□□□ -2.14
SCAF11-210ENST00000547654 TRAV13-2A0A0B4J235 113 aa1.69□□□□□ -2.14
SCAF11-210ENST00000547654 HCG22E2RYF7 251 aa1.69□□□□□ -2.14
SCAF11-210ENST00000547654 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
SCAF11-210ENST00000547654 DCDP81605 110 aaKnown RBP1.69□□□□□ -2.14
SCAF11-210ENST00000547654 FXYD3Q14802 87 aa1.69□□□□□ -2.14
SCAF11-210ENST00000547654 BET1LQ9NYM9 111 aa1.69□□□□□ -2.14
SCAF11-210ENST00000547654 UBE2L5PA0A1B0GUS4 154 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 FXYD1O00168 92 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 CAV3P56539 151 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 S100A10P60903 97 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 UBE2L3P68036 154 aaKnown RBP1.68□□□□□ -2.14
SCAF11-210ENST00000547654 ZNF56Q15929 161 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 ZNF818PQ6ZRF7 136 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 Q86TA4 180 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 C20orf197Q8N268 126 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 LINC00208Q96KT6 92 aa1.68□□□□□ -2.14
SCAF11-210ENST00000547654 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 NBDYA0A0U1RRE5 68 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 SIX6O95475 246 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 ATP5EP56381 51 aaPredicted RBP1.67□□□□□ -2.14
SCAF11-210ENST00000547654 SSBP1Q04837 148 aaKnown RBP1.67□□□□□ -2.14
SCAF11-210ENST00000547654 FAM74A4Q5TZK3 123 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 C5orf56Q8N8D9 126 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 DPH3P1Q9H4G8 78 aa1.67□□□□□ -2.14
SCAF11-210ENST00000547654 TRBV30A0A0K0K1B3 111 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 RBAKDNA6NC62 111 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 TMEM262E9PQX1 116 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 PKIAP61925 76 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 NCMAPQ5T1S8 102 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 COMMD6Q7Z4G1 85 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 MYOZ3Q8TDC0 251 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 LINC00312Q9Y6C7 94 aa1.66□□□□□ -2.14
SCAF11-210ENST00000547654 LYNX1P0DP58 116 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 UBE2D1P51668 147 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 DEFB121Q5J5C9 76 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 C10orf128Q5T292 105 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 COX7B2Q8TF08 81 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 CYP4F30PQ9H0H9 118 aa1.65□□□□□ -2.15
SCAF11-210ENST00000547654 TRBV7-1A0A0A6YYK4 115 aa1.64□□□□□ -2.15
SCAF11-210ENST00000547654 H3BQ15 152 aa1.64□□□□□ -2.15
SCAF11-210ENST00000547654 CCL3L1P16619 93 aa1.64□□□□□ -2.15
SCAF11-210ENST00000547654 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
SCAF11-210ENST00000547654 A0A1W2PPM0 123 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 ANGP03950 147 aaKnown RBP1.63□□□□□ -2.15
SCAF11-210ENST00000547654 UQCRHP07919 91 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 SNCAP37840 140 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 EFNA4P52798 201 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 KLKP1Q107X0 134 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 DEFB110Q30KQ9 67 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 LELP1Q5T871 98 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 Q6ZSA8 131 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 COX14Q96I36 57 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 BPESC1Q9GZL8 116 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 AP4S1Q9Y587 144 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 V9GYV3 84 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 NEBP20929 6669 aa1.63□□□□□ -2.15
SCAF11-210ENST00000547654 CLPSL1A2RUU4 121 aa1.62□□□□□ -2.15
SCAF11-210ENST00000547654 ELOF1P60002 83 aaKnown RBP1.62□□□□□ -2.15
SCAF11-210ENST00000547654 COL5A1-AS1Q5SY13 56 aa1.62□□□□□ -2.15
SCAF11-210ENST00000547654 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 LINC00032P0C843 101 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 GNG11P61952 73 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 TMEM14BQ9NUH8 114 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 SCP2D1Q9UJQ7 156 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 LPAP08519 4548 aa1.61□□□□□ -2.15
SCAF11-210ENST00000547654 SYNE2Q8WXH0 6885 aaKnown RBP1.61□□□□□ -2.15
SCAF11-210ENST00000547654 DNAH8Q96JB1 4490 aa1.6□□□□□ -2.15
SCAF11-210ENST00000547654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.6□□□□□ -2.15
SCAF11-210ENST00000547654 LY6G6CO95867 125 aa1.6□□□□□ -2.15
SCAF11-210ENST00000547654 EDDM3BP56851 147 aa1.6□□□□□ -2.15
SCAF11-210ENST00000547654 C10orf99Q6UWK7 81 aa1.6□□□□□ -2.15
SCAF11-210ENST00000547654 USH2AO75445 5202 aa1.6□□□□□ -2.15
SCAF11-210ENST00000547654 TNCP24821 2201 aa1.59□□□□□ -2.15
SCAF11-210ENST00000547654 MPC2O95563 127 aa1.59□□□□□ -2.15
SCAF11-210ENST00000547654 KRTDAPP60985 99 aa1.59□□□□□ -2.15
SCAF11-210ENST00000547654 DPY30Q9C005 99 aa1.59□□□□□ -2.15
SCAF11-210ENST00000547654 SORL1Q92673 2214 aa1.58□□□□□ -2.16
SCAF11-210ENST00000547654 NAP1L6A6NFF2 107 aa1.58□□□□□ -2.16
SCAF11-210ENST00000547654 WFDC9Q8NEX5 89 aa1.58□□□□□ -2.16
SCAF11-210ENST00000547654 FAIMQ9NVQ4 179 aa1.58□□□□□ -2.16
SCAF11-210ENST00000547654 LINC00474Q9P2X8 69 aa1.58□□□□□ -2.16
SCAF11-210ENST00000547654 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
SCAF11-210ENST00000547654 TRBV7-3A0A075B6L6 115 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 PPP1R17O96001 155 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 ASIPP42127 132 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 SPINK13Q1W4C9 94 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 TSLPQ969D9 159 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 Q9H521 79 aa1.57□□□□□ -2.16
SCAF11-210ENST00000547654 GNGT2O14610 69 aa1.56□□□□□ -2.16
SCAF11-210ENST00000547654 GNG2P59768 71 aa1.56□□□□□ -2.16
SCAF11-210ENST00000547654 ZNF720Q7Z2F6 126 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms