RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 LINC00467Q9BRT7 94 aa4.44□□□□□ -1.7
CCDC60-205ENST00000546345 UPK3BQ9BT76 320 aa4.44□□□□□ -1.7
CCDC60-205ENST00000546345 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
CCDC60-205ENST00000546345 TRAV12-2A0A075B6T6 113 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 CCL18P55774 89 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 NPC2P61916 151 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
CCDC60-205ENST00000546345 PRR9Q5T870 116 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 LAMTOR3Q9UHA4 124 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
CCDC60-205ENST00000546345 IGHV3OR16-12A0A075B7B8 117 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 F8WDY8 70 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 PRB4P10163 310 aaPredicted RBP4.42□□□□□ -1.7
CCDC60-205ENST00000546345 PDE6GP18545 87 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 DEFB1P60022 68 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 DAD1P61803 113 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 LYPD5Q6UWN5 251 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 C1orf158Q8N1D5 194 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 CLEC2BQ92478 149 aa4.42□□□□□ -1.7
CCDC60-205ENST00000546345 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 F5H768 121 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 GNRH2O43555 120 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 CRPP02741 224 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 Q6ZSA8 131 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 SMCR5Q8TEV8 140 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 UBE2D4Q9Y2X8 147 aa4.41□□□□□ -1.7
CCDC60-205ENST00000546345 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
CCDC60-205ENST00000546345 A8MTW9 85 aa4.4□□□□□ -1.71
CCDC60-205ENST00000546345 PRM2P04554 102 aa4.4□□□□□ -1.71
CCDC60-205ENST00000546345 ESRGQ1W209 222 aa4.4□□□□□ -1.71
CCDC60-205ENST00000546345 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
CCDC60-205ENST00000546345 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 TRBV10-1A0A0K0K1A3 114 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 ERC2-IT1O76042 136 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 CCKP06307 115 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 LELP1Q5T871 98 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 LPAP08519 4548 aa4.39□□□□□ -1.71
CCDC60-205ENST00000546345 MUC2Q02817 5179 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 IGHV3-53P01767 116 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 FAM74A4Q5TZK3 123 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 ZNF625Q96I27 306 aaPredicted RBP4.38□□□□□ -1.71
CCDC60-205ENST00000546345 LINC00167Q96N53 147 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 JPT2Q9H910 190 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 ORMDL1Q9P0S3 153 aa4.38□□□□□ -1.71
CCDC60-205ENST00000546345 FAM236DA0A1B0GTK5 79 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 LYRM9A8MSI8 78 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 IBA57-AS1B1ANH7 110 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 FAM236CP0DP71 79 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 Q5XG85 94 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 CHCHD7Q9BUK0 85 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
CCDC60-205ENST00000546345 TRAV12-3A0A0B4J271 114 aa4.36□□□□□ -1.71
CCDC60-205ENST00000546345 SMIM29Q86T20 159 aa4.36□□□□□ -1.71
CCDC60-205ENST00000546345 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
CCDC60-205ENST00000546345 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
CCDC60-205ENST00000546345 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
CCDC60-205ENST00000546345 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 PFN2P35080 140 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 CXCL6P80162 114 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 SCXQ7RTU7 201 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
CCDC60-205ENST00000546345 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 F6UB75 175 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 MT3P25713 68 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 COX17Q14061 63 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
CCDC60-205ENST00000546345 LINC00846Q9NV44 126 aa4.34□□□□□ -1.71
CCDC60-205ENST00000546345 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 A0A087WYN8 130 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 A0A096LPF7 62 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 RS1O15537 224 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 XCL1P47992 114 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 LINC00612Q8N6U2 182 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
CCDC60-205ENST00000546345 A0A1B0GW54 56 aa4.32□□□□□ -1.72
CCDC60-205ENST00000546345 K7EQD1 137 aa4.32□□□□□ -1.72
CCDC60-205ENST00000546345 Q75L30 129 aa4.32□□□□□ -1.72
CCDC60-205ENST00000546345 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 H3BNG1 76 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 H7BZZ5 65 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 Q8N814 137 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 SMIM11BQ8TCY0 68 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 COX7B2Q8TF08 81 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
CCDC60-205ENST00000546345 C4orf26Q17RF5 130 aa4.3□□□□□ -1.72
CCDC60-205ENST00000546345 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
CCDC60-205ENST00000546345 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms