RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 FAM236BA0A1B0GV22 79 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 E7EQL1 145 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 PSCAO43653 123 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 COX7CP15954 63 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 SNRPD3P62318 126 aaKnown RBP2.84□□□□□ -1.95
CIT-211ENST00000541841 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.95
CIT-211ENST00000541841 MAP1AP78559 2803 aaPredicted RBP2.83□□□□□ -1.96
CIT-211ENST00000541841 TRAV13-2A0A0B4J235 113 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 NPFFO15130 113 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 MRPS36P82909 103 aaKnown RBP2.83□□□□□ -1.96
CIT-211ENST00000541841 ATP5EP2Q5VTU8 51 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 HRCT1Q6UXD1 115 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 Q8NDZ9 215 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 DNHD1Q96M86 4753 aa2.83□□□□□ -1.96
CIT-211ENST00000541841 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 TRAV7A0A075B6U4 112 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 CLPSL1A2RUU4 121 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 NDUFA1O15239 70 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 CRPP02741 224 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 MSMBP08118 114 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 CRYGAP11844 174 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 RNASE3P12724 160 aaKnown RBP2.82□□□□□ -1.96
CIT-211ENST00000541841 RPL39P62891 51 aaKnown RBP2.82□□□□□ -1.96
CIT-211ENST00000541841 FAM74A4Q5TZK3 123 aa2.82□□□□□ -1.96
CIT-211ENST00000541841 AKAP9Q99996 3911 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 NBEAL1Q6ZS30 2694 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 H0YGX0 51 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 TMEM256-PLSCR3K7ERE1 68 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 AMELXQ99217 191 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 JMJD1CQ15652 2540 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 STAB1Q9NY15 2570 aa2.81□□□□□ -1.96
CIT-211ENST00000541841 PKDREJQ9NTG1 2253 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 IGHV3-64A0A075B6Q5 118 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 hADV29S1A0JD25 119 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 M0QY20 66 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 BCE1O60756 84 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 BAALC-AS2P0C853 105 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 PRR9Q5T870 116 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 Q6JHZ5 121 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 C5orf56Q8N8D9 126 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 CLEC2BQ92478 149 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 RHPN1-AS1Q9BWJ2 59 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 ACANP16112 2415 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
CIT-211ENST00000541841 PLCE1Q9P212 2302 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 CADP27708 2225 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 TRAV12-3A0A0B4J271 114 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 JMJD7-PLA2G4BH0Y9G9 81 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 LINC00694P0DN24 101 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 PRB4P10163 310 aaPredicted RBP2.79□□□□□ -1.96
CIT-211ENST00000541841 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
CIT-211ENST00000541841 C5orf38Q86SI9 138 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 COL6A5A8TX70 2615 aa2.79□□□□□ -1.96
CIT-211ENST00000541841 TRAV13-1A0A0B4J241 112 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 LYNX1G3V0Z9 82 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 G3V318 75 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 LYNX1P0DP58 116 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 NPC2P61916 151 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 UBE2BP63146 152 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 ATRQ13535 2644 aa2.78□□□□□ -1.96
CIT-211ENST00000541841 CSPG4Q6UVK1 2322 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 TRBV10-1A0A0K0K1A3 114 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 TRBV10-3A0A0K0K1G6 114 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 NDUFC1O43677 76 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
CIT-211ENST00000541841 LINC00467Q9BRT7 94 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 UBL5Q9BZL1 73 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 ORMDL1Q9P0S3 153 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 UBE2D4Q9Y2X8 147 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 ABCA4P78363 2273 aa2.77□□□□□ -1.97
CIT-211ENST00000541841 IGKV3-7A0A075B6H7 116 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 C19orf84I3L1E1 186 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 PDE6GP18545 87 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 PRR15Q8IV56 129 aa2.76□□□□□ -1.97
CIT-211ENST00000541841 NSD1Q96L73 2696 aaPredicted RBP2.75□□□□□ -1.97
CIT-211ENST00000541841 IGLV10-54A0A075B6I4 117 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 SPINK13Q1W4C9 94 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 C3orf56Q8N813 242 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 DPH3Q96FX2 82 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 CDKN2A-AS1Q9UH64 79 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 MUC4Q99102 2169 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 ABCA1O95477 2261 aa2.75□□□□□ -1.97
CIT-211ENST00000541841 ZNF469Q96JG9 3925 aaPredicted RBP2.74□□□□□ -1.97
CIT-211ENST00000541841 FLNAP21333 2647 aaKnown RBP2.74□□□□□ -1.97
CIT-211ENST00000541841 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
CIT-211ENST00000541841 AKAP6Q13023 2319 aa2.74□□□□□ -1.97
CIT-211ENST00000541841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
CIT-211ENST00000541841 TRAV12-2A0A075B6T6 113 aa2.74□□□□□ -1.97
CIT-211ENST00000541841 LOC107984640A0A0U1RRK4 108 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms