RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.57□□□□□ -2.32
RAP1B-224ENST00000541216 FGFR1OP2Q9NVK5 253 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 U3KQ87 197 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 TRAV13-1A0A0B4J241 112 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 TRBV30A0A0K0K1B3 111 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 ARMS2P0C7Q2 107 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 C10orf113Q5VZT2 155 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 LCA10Q71F78 164 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 ATG5Q9H1Y0 275 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 LENEPQ9Y5L5 61 aa0.56□□□□□ -2.32
RAP1B-224ENST00000541216 MGPP08493 103 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 TPT1P13693 172 aaKnown RBP0.55□□□□□ -2.32
RAP1B-224ENST00000541216 RRAS2P62070 204 aaPredicted RBP0.55□□□□□ -2.32
RAP1B-224ENST00000541216 PMAIP1Q13794 54 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 PDE6HQ13956 83 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 GOLT1AQ6ZVE7 132 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 HYLS1Q96M11 299 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 HOPXQ9BPY8 73 aaPredicted RBP0.55□□□□□ -2.32
RAP1B-224ENST00000541216 NMES1Q9C002 83 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 CCDC90BQ9GZT6 254 aa0.55□□□□□ -2.32
RAP1B-224ENST00000541216 C3orf85A0A1B0GTC6 90 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 C1orf196B1AJZ1 125 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 EDF1O60869 148 aaKnown RBP0.54□□□□□ -2.32
RAP1B-224ENST00000541216 ZNF25P17030 456 aaPredicted RBP0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BOP23527 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BBP33778 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BDP58876 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 NCS1P62166 190 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BCP62807 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 RANP62826 216 aaKnown RBP0.54□□□□□ -2.32
RAP1B-224ENST00000541216 IFITM2Q01629 132 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST2H2BEQ16778 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.54□□□□□ -2.32
RAP1B-224ENST00000541216 Q5XG85 94 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 WFDC13Q8IUB5 93 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 C12orf45Q8N5I9 185 aaPredicted RBP0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BHQ93079 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BNQ99877 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 HIST1H2BMQ99879 126 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 SAR1AQ9NR31 198 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 TMEM14CQ9P0S9 112 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 ZFP30Q9Y2G7 519 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 ARL2-SNX15V9GYD0 113 aa0.54□□□□□ -2.32
RAP1B-224ENST00000541216 M0QY20 66 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 TMBIM6P55061 237 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 AP3S2P59780 193 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 GNG5P63218 68 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 KLKP1Q107X0 134 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 SPANXN5Q5MJ07 72 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 IFT20Q8IY31 132 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 OR10AG1Q8NH19 301 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 PLAC4Q8WY50 150 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 SCGB3A1Q96QR1 104 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 CDC42SE2Q9NRR3 84 aa0.53□□□□□ -2.32
RAP1B-224ENST00000541216 A0A087WSZ3 146 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 A0A1B0GV50 99 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 NBEAP1P0C6P0 100 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 SMIM17P0DL12 118 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 CASQ1P31415 396 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 UBE2L3P68036 154 aaKnown RBP0.52□□□□□ -2.33
RAP1B-224ENST00000541216 SMCO1Q147U7 214 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 MIC13Q5XKP0 118 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 TERB2Q8NHR7 220 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
RAP1B-224ENST00000541216 MGST2Q99735 147 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 LYRM2Q9NU23 88 aaPredicted RBP0.52□□□□□ -2.33
RAP1B-224ENST00000541216 AP4S1Q9Y587 144 aa0.52□□□□□ -2.33
RAP1B-224ENST00000541216 ETDCA0A1B0GVM5 59 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 IFITM5A6NNB3 132 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 PDE6GP18545 87 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 CKS1BP61024 79 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 H1FX-AS1Q4G0G2 97 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 SPANXN1Q5VSR9 72 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 Q6ZUT4 128 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 MIR17HGQ75NE6 70 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 PRR15Q8IV56 129 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 MCFD2Q8NI22 146 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 MT1LQ93083 61 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 AP1S3Q96PC3 154 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 PFDN5Q99471 154 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 TOMM7Q9P0U1 55 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 COPZ2Q9P299 210 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 CACFD1Q9UGQ2 172 aa0.51□□□□□ -2.33
RAP1B-224ENST00000541216 NCR2O95944 276 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 TCL1BO95988 128 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 SPINK7P58062 85 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 FAM167A-AS1Q96KT0 104 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 NIT2Q9NQR4 276 aa0.5□□□□□ -2.33
RAP1B-224ENST00000541216 TGIF2-C20orf24A0A0A6YYL0 155 aa0.49□□□□□ -2.33
RAP1B-224ENST00000541216 CXCL1P09341 107 aa0.49□□□□□ -2.33
RAP1B-224ENST00000541216 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
RAP1B-224ENST00000541216 UBE2L5PA0A1B0GUS4 154 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 C7orf77A4D0Y5 90 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 EFCAB10A6NFE3 127 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 F8VRH5 84 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 PDCD5O14737 125 aa0.48□□□□□ -2.33
RAP1B-224ENST00000541216 MAGOHP61326 146 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms