RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 M0R378 163 aa7.12□□□□□ -1.27
RTN3-208ENST00000537981 ODF3L2Q3SX64 289 aa7.11□□□□□ -1.27
RTN3-208ENST00000537981 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
RTN3-208ENST00000537981 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
RTN3-208ENST00000537981 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
RTN3-208ENST00000537981 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.1□□□□□ -1.27
RTN3-208ENST00000537981 NDUFS5O43920 106 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 PDE6GP18545 87 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 COX7BP24311 80 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 WFDC10AQ9H1F0 79 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 FLNAP21333 2647 aaKnown RBP7.1□□□□□ -1.27
RTN3-208ENST00000537981 LCA10Q71F78 164 aa7.1□□□□□ -1.27
RTN3-208ENST00000537981 HIVEP1P15822 2718 aa7.09□□□□□ -1.27
RTN3-208ENST00000537981 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
RTN3-208ENST00000537981 F8P00451 2351 aa7.09□□□□□ -1.27
RTN3-208ENST00000537981 DIRC1Q969H9 104 aa7.08□□□□□ -1.28
RTN3-208ENST00000537981 CCL19Q99731 98 aa7.08□□□□□ -1.28
RTN3-208ENST00000537981 LCE6AA0A183 80 aa7.07□□□□□ -1.28
RTN3-208ENST00000537981 GIG44P09565 113 aaPredicted RBP7.07□□□□□ -1.28
RTN3-208ENST00000537981 B4DSR2 109 aa7.06□□□□□ -1.28
RTN3-208ENST00000537981 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
RTN3-208ENST00000537981 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
RTN3-208ENST00000537981 DEFB112Q30KQ8 113 aa7.06□□□□□ -1.28
RTN3-208ENST00000537981 IGHV4-30-4P0DP06 118 aa7.06□□□□□ -1.28
RTN3-208ENST00000537981 ZNF73O43830 326 aaPredicted RBP7.05□□□□□ -1.28
RTN3-208ENST00000537981 UBE2BP63146 152 aa7.05□□□□□ -1.28
RTN3-208ENST00000537981 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
RTN3-208ENST00000537981 COX17Q14061 63 aa7.05□□□□□ -1.28
RTN3-208ENST00000537981 DEFB114Q30KQ6 69 aa7.04□□□□□ -1.28
RTN3-208ENST00000537981 MAPK1IP1LQ8NDC0 245 aa7.04□□□□□ -1.28
RTN3-208ENST00000537981 CHCHD10Q8WYQ3 142 aaPredicted RBP7.04□□□□□ -1.28
RTN3-208ENST00000537981 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
RTN3-208ENST00000537981 A6NN06 94 aa7.04□□□□□ -1.28
RTN3-208ENST00000537981 DEFB105AQ8NG35 78 aa7.04□□□□□ -1.28
RTN3-208ENST00000537981 DEFB113Q30KQ7 82 aa7.03□□□□□ -1.28
RTN3-208ENST00000537981 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
RTN3-208ENST00000537981 DEFB130BP0DP73 79 aa7.03□□□□□ -1.28
RTN3-208ENST00000537981 DEFB130AP0DP74 79 aa7.03□□□□□ -1.28
RTN3-208ENST00000537981 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
RTN3-208ENST00000537981 HIGD2BQ4VC39 106 aa7.03□□□□□ -1.28
RTN3-208ENST00000537981 IGHV4-30-2A0A087WSY4 118 aa7.02□□□□□ -1.29
RTN3-208ENST00000537981 K7EQZ3 153 aa7.02□□□□□ -1.29
RTN3-208ENST00000537981 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
RTN3-208ENST00000537981 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
RTN3-208ENST00000537981 CDK2AP2O75956 126 aa7.01□□□□□ -1.29
RTN3-208ENST00000537981 UBE2AP49459 152 aa7□□□□□ -1.29
RTN3-208ENST00000537981 DSCR10P59022 87 aa7□□□□□ -1.29
RTN3-208ENST00000537981 SMR3AQ99954 134 aa7□□□□□ -1.29
RTN3-208ENST00000537981 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
RTN3-208ENST00000537981 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
RTN3-208ENST00000537981 ZNF702PQ9H963 129 aa7□□□□□ -1.29
RTN3-208ENST00000537981 VWFP04275 2813 aa6.99□□□□□ -1.29
RTN3-208ENST00000537981 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
RTN3-208ENST00000537981 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
RTN3-208ENST00000537981 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
RTN3-208ENST00000537981 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
RTN3-208ENST00000537981 PHF5AQ7RTV0 110 aaKnown RBP6.99□□□□□ -1.29
RTN3-208ENST00000537981 KRTAP1-3Q8IUG1 177 aa6.99□□□□□ -1.29
RTN3-208ENST00000537981 A0A0G2JQZ4 141 aa6.98□□□□□ -1.29
RTN3-208ENST00000537981 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
RTN3-208ENST00000537981 A0A1W2PNN7 141 aa6.98□□□□□ -1.29
RTN3-208ENST00000537981 CSNK1G2-AS1Q8NCQ2 148 aa6.98□□□□□ -1.29
RTN3-208ENST00000537981 A6NED7 52 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 DNAJC9-AS1A6NH13 148 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 REG3AQ06141 175 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 A0A1B0GUV1 79 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 C6orf48Q9UBA6 75 aa6.97□□□□□ -1.29
RTN3-208ENST00000537981 MSMBP08118 114 aa6.96□□□□□ -1.29
RTN3-208ENST00000537981 H0Y9J4 135 aa6.95□□□□□ -1.3
RTN3-208ENST00000537981 FSHBP01225 129 aa6.95□□□□□ -1.3
RTN3-208ENST00000537981 HIVEP2P31629 2446 aa6.95□□□□□ -1.3
RTN3-208ENST00000537981 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
RTN3-208ENST00000537981 Q8N377 158 aa6.95□□□□□ -1.3
RTN3-208ENST00000537981 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
RTN3-208ENST00000537981 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
RTN3-208ENST00000537981 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
RTN3-208ENST00000537981 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
RTN3-208ENST00000537981 MOBPQ13875 183 aa6.94□□□□□ -1.3
RTN3-208ENST00000537981 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
RTN3-208ENST00000537981 NSD1Q96L73 2696 aaPredicted RBP6.93□□□□□ -1.3
RTN3-208ENST00000537981 A0A0J9YWU9 116 aa6.93□□□□□ -1.3
RTN3-208ENST00000537981 DSCR9P59020 149 aa6.93□□□□□ -1.3
RTN3-208ENST00000537981 FBN1P35555 2871 aaKnown RBP6.92□□□□□ -1.3
RTN3-208ENST00000537981 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
RTN3-208ENST00000537981 H3BQ85 93 aa6.92□□□□□ -1.3
RTN3-208ENST00000537981 MP68P56378 58 aa6.91□□□□□ -1.3
RTN3-208ENST00000537981 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
RTN3-208ENST00000537981 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
RTN3-208ENST00000537981 DEFB4AO15263 64 aa6.9□□□□□ -1.31
RTN3-208ENST00000537981 LINC00313P59037 77 aa6.9□□□□□ -1.31
RTN3-208ENST00000537981 WFDC10BQ8IUB3 73 aa6.9□□□□□ -1.31
RTN3-208ENST00000537981 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
RTN3-208ENST00000537981 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
RTN3-208ENST00000537981 SPINK7P58062 85 aa6.88□□□□□ -1.31
RTN3-208ENST00000537981 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
RTN3-208ENST00000537981 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
RTN3-208ENST00000537981 C4orf3Q8WVX3 66 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms