RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
USP28-205ENST00000537706 HERV-K104P63124 156 aa5.31□□□□□ -1.56
USP28-205ENST00000537706 PRO1854Q9UHT4 67 aa5.31□□□□□ -1.56
USP28-205ENST00000537706 XCL1P47992 114 aa5.31□□□□□ -1.56
USP28-205ENST00000537706 MT1HP80294 61 aa5.31□□□□□ -1.56
USP28-205ENST00000537706 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
USP28-205ENST00000537706 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
USP28-205ENST00000537706 M0R2T5 61 aa5.3□□□□□ -1.56
USP28-205ENST00000537706 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
USP28-205ENST00000537706 COPS9Q8WXC6 57 aa5.3□□□□□ -1.56
USP28-205ENST00000537706 LINC00959A0A1B0GUT2 108 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
USP28-205ENST00000537706 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 MALP21145 153 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
USP28-205ENST00000537706 FAM19A5Q7Z5A7 132 aaPredicted RBP5.29□□□□□ -1.56
USP28-205ENST00000537706 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 F8W1H4 67 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 PRSS2P07478 247 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 SS18Q15532 418 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
USP28-205ENST00000537706 A0A087X002 238 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 H3BMG7 143 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 MEIG1Q5JSS6 88 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 C2orf48Q96LS8 159 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 PRO0461Q9UI25 63 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 K7ERU9 68 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 M0QXV9 152 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 DAND5Q8N907 189 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 LINC00308Q8TCZ7 52 aa5.27□□□□□ -1.57
USP28-205ENST00000537706 NPC2P61916 151 aa5.26□□□□□ -1.57
USP28-205ENST00000537706 Q1RN00 199 aa5.26□□□□□ -1.57
USP28-205ENST00000537706 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
USP28-205ENST00000537706 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
USP28-205ENST00000537706 TRBV30A0A0K0K1B3 111 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
USP28-205ENST00000537706 PSMB2P49721 201 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 Q8IZM0 81 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 TCL1BO95988 128 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 C5orf38Q86SI9 138 aa5.25□□□□□ -1.57
USP28-205ENST00000537706 H7C2G1 150 aa5.24□□□□□ -1.57
USP28-205ENST00000537706 TRIAP1O43715 76 aa5.24□□□□□ -1.57
USP28-205ENST00000537706 SCGB1C2P0DMR2 95 aa5.24□□□□□ -1.57
USP28-205ENST00000537706 SOSTDC1Q6X4U4 206 aa5.24□□□□□ -1.57
USP28-205ENST00000537706 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
USP28-205ENST00000537706 COX7A2LO14548 114 aa5.23□□□□□ -1.57
USP28-205ENST00000537706 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
USP28-205ENST00000537706 CXCL5P42830 114 aa5.23□□□□□ -1.57
USP28-205ENST00000537706 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
USP28-205ENST00000537706 F8WDY8 70 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 COX6CP09669 75 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 ATXN8Q156A1 80 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 MTURNQ8N3F0 131 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
USP28-205ENST00000537706 SMCPP49901 116 aaPredicted RBP5.21□□□□□ -1.57
USP28-205ENST00000537706 C6orf226Q5I0X4 101 aa5.21□□□□□ -1.57
USP28-205ENST00000537706 LINC00158P58513 81 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 SPAG11BQ08648 103 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 ETDBQ3ZM63 59 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 GAGE2EQ4V326 116 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 GAGE2DQ9UEU5 116 aa5.21□□□□□ -1.58
USP28-205ENST00000537706 TRAV13-2A0A0B4J235 113 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 J3QR89 54 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 CKS1BP61024 79 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 SND1-IT1Q9HBX3 110 aa5.2□□□□□ -1.58
USP28-205ENST00000537706 TLX1NBP0CAT3 122 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 COX17Q14061 63 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 TEN1Q86WV5 123 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 CBY1Q9Y3M2 126 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 C9JAW5 83 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 LST1O00453 97 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 SLC25A20O43772 301 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 PFN2P35080 140 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 C4orf48Q5BLP8 95 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 C2orf82Q6UX34 121 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 VPS25Q9BRG1 176 aa5.19□□□□□ -1.58
USP28-205ENST00000537706 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
USP28-205ENST00000537706 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 TRBV10-2A0A0K0K1G8 114 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 PPDPFLQ8WWR9 84 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 H3BT86 120 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 BCE1O60756 84 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 KRTAP19-2Q3LHN2 52 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 CLEC2BQ92478 149 aa5.17□□□□□ -1.58
USP28-205ENST00000537706 NDUFC2O95298 119 aa5.15□□□□□ -1.59
USP28-205ENST00000537706 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms