RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 CACNA1CQ13936 2221 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 ANKRD17O75179 2603 aaKnown RBP1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 C10orf99Q6UWK7 81 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 SEC16AO15027 2179 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 PRR14LQ5THK1 2151 aa1.75□□□□□ -2.13
SPARCL1-208ENST00000535835 MINOS1Q5TGZ0 78 aa1.74□□□□□ -2.13
SPARCL1-208ENST00000535835 Q6ZRX8 168 aa1.74□□□□□ -2.13
SPARCL1-208ENST00000535835 PRO3102Q9H379 93 aa1.74□□□□□ -2.13
SPARCL1-208ENST00000535835 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
SPARCL1-208ENST00000535835 UNC13CQ8NB66 2214 aa1.74□□□□□ -2.13
SPARCL1-208ENST00000535835 DEFB108AA8MXU0 73 aa1.73□□□□□ -2.13
SPARCL1-208ENST00000535835 PRB1P04280 392 aa1.73□□□□□ -2.13
SPARCL1-208ENST00000535835 TPRXLQ17RH7 258 aa1.73□□□□□ -2.13
SPARCL1-208ENST00000535835 COL4A5P29400 1685 aa1.73□□□□□ -2.13
SPARCL1-208ENST00000535835 F5P12259 2224 aa1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 GVQW2A0A096LPI5 108 aaPredicted RBP1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 G3V318 75 aa1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 H0YGG7 62 aa1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 KRTAP10-10P60014 251 aa1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 USF3Q68DE3 2245 aa1.72□□□□□ -2.13
SPARCL1-208ENST00000535835 KNTC1P50748 2209 aa1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 PRB3Q04118 309 aaPredicted RBP1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 PLCE1Q9P212 2302 aa1.71□□□□□ -2.14
SPARCL1-208ENST00000535835 CADP27708 2225 aa1.7□□□□□ -2.14
SPARCL1-208ENST00000535835 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
SPARCL1-208ENST00000535835 PRR9Q5T870 116 aa1.7□□□□□ -2.14
SPARCL1-208ENST00000535835 Q6ZRN7 208 aaPredicted RBP1.7□□□□□ -2.14
SPARCL1-208ENST00000535835 MED13LQ71F56 2210 aa1.69□□□□□ -2.14
SPARCL1-208ENST00000535835 PCOTHQ58A44 107 aa1.69□□□□□ -2.14
SPARCL1-208ENST00000535835 WFDC10BQ8IUB3 73 aa1.69□□□□□ -2.14
SPARCL1-208ENST00000535835 WFDC13Q8IUB5 93 aa1.69□□□□□ -2.14
SPARCL1-208ENST00000535835 KAAG1Q9UBP8 84 aa1.69□□□□□ -2.14
SPARCL1-208ENST00000535835 DEFB109BQ30KR1 87 aa1.68□□□□□ -2.14
SPARCL1-208ENST00000535835 USMG5Q96IX5 58 aa1.68□□□□□ -2.14
SPARCL1-208ENST00000535835 BPTFQ12830 3046 aa1.68□□□□□ -2.14
SPARCL1-208ENST00000535835 MMP24-AS1A0A0U1RRL7 71 aa1.67□□□□□ -2.14
SPARCL1-208ENST00000535835 SPINK13Q1W4C9 94 aa1.67□□□□□ -2.14
SPARCL1-208ENST00000535835 Q6ZSA8 131 aa1.67□□□□□ -2.14
SPARCL1-208ENST00000535835 TOMM7Q9P0U1 55 aa1.67□□□□□ -2.14
SPARCL1-208ENST00000535835 SORL1Q92673 2214 aa1.66□□□□□ -2.14
SPARCL1-208ENST00000535835 H0YAA0 97 aa1.66□□□□□ -2.14
SPARCL1-208ENST00000535835 STATHP02808 62 aa1.66□□□□□ -2.14
SPARCL1-208ENST00000535835 RP1P56715 2156 aa1.66□□□□□ -2.14
SPARCL1-208ENST00000535835 A8MTW9 85 aa1.65□□□□□ -2.15
SPARCL1-208ENST00000535835 RPL37P61927 97 aaKnown RBP1.64□□□□□ -2.15
SPARCL1-208ENST00000535835 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
SPARCL1-208ENST00000535835 DEFB123Q8N688 67 aa1.64□□□□□ -2.15
SPARCL1-208ENST00000535835 PTPRQQ9UMZ3 2332 aa1.63□□□□□ -2.15
SPARCL1-208ENST00000535835 H3BUA1 57 aa1.63□□□□□ -2.15
SPARCL1-208ENST00000535835 SPRR1AP35321 89 aa1.63□□□□□ -2.15
SPARCL1-208ENST00000535835 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
SPARCL1-208ENST00000535835 KNL1Q8NG31 2342 aa1.63□□□□□ -2.15
SPARCL1-208ENST00000535835 ZFHX2Q9C0A1 2572 aaPredicted RBP1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 CNTRLQ7Z7A1 2325 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 TPRP12270 2363 aaKnown RBP1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 LYNX1P0DP58 116 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 IGFL1Q6UW32 110 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 UBE2DNLQ8IWF7 75 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 URB1O60287 2271 aaKnown RBP1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 AHCTF1Q8WYP5 2266 aa1.62□□□□□ -2.15
SPARCL1-208ENST00000535835 ALMS1Q8TCU4 4167 aa1.61□□□□□ -2.15
SPARCL1-208ENST00000535835 DEFB104AQ8WTQ1 72 aa1.61□□□□□ -2.15
SPARCL1-208ENST00000535835 HIVEP2P31629 2446 aa1.61□□□□□ -2.15
SPARCL1-208ENST00000535835 BRWD1Q9NSI6 2320 aa1.61□□□□□ -2.15
SPARCL1-208ENST00000535835 TECTAO75443 2155 aa1.61□□□□□ -2.15
SPARCL1-208ENST00000535835 K7EIL1 84 aa1.6□□□□□ -2.15
SPARCL1-208ENST00000535835 SPRR1BP22528 89 aa1.6□□□□□ -2.15
SPARCL1-208ENST00000535835 BRD3OSQ6XYD6 125 aa1.6□□□□□ -2.15
SPARCL1-208ENST00000535835 COL27A1Q8IZC6 1860 aaPredicted RBP1.6□□□□□ -2.15
SPARCL1-208ENST00000535835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.15
SPARCL1-208ENST00000535835 H3BUX3 64 aa1.59□□□□□ -2.15
SPARCL1-208ENST00000535835 DEFB130BP0DP73 79 aa1.59□□□□□ -2.15
SPARCL1-208ENST00000535835 DEFB130AP0DP74 79 aa1.59□□□□□ -2.15
SPARCL1-208ENST00000535835 CNOT1A5YKK6 2376 aaKnown RBP1.59□□□□□ -2.16
SPARCL1-208ENST00000535835 CACNA1EQ15878 2313 aa1.58□□□□□ -2.16
SPARCL1-208ENST00000535835 ASCC3Q8N3C0 2202 aaKnown RBP1.58□□□□□ -2.16
SPARCL1-208ENST00000535835 ASXL3Q9C0F0 2248 aa1.58□□□□□ -2.16
SPARCL1-208ENST00000535835 DOPEY2Q9Y3R5 2298 aa1.57□□□□□ -2.16
SPARCL1-208ENST00000535835 CACNA1BQ00975 2339 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 SPRR5A0A1B0GTR4 108 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 DEFB105AQ8NG35 78 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 RHPN1-AS1Q9BWJ2 59 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 Q9Y3F1 56 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 RTTNQ86VV8 2226 aa1.56□□□□□ -2.16
SPARCL1-208ENST00000535835 WNK2Q9Y3S1 2297 aa1.55□□□□□ -2.16
SPARCL1-208ENST00000535835 APELAP0DMC3 54 aa1.55□□□□□ -2.16
SPARCL1-208ENST00000535835 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
SPARCL1-208ENST00000535835 KRTAP13-2Q52LG2 175 aa1.54□□□□□ -2.16
SPARCL1-208ENST00000535835 DEFB110Q30KQ9 67 aa1.53□□□□□ -2.16
SPARCL1-208ENST00000535835 ICE1Q9Y2F5 2266 aa1.53□□□□□ -2.16
SPARCL1-208ENST00000535835 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
SPARCL1-208ENST00000535835 FLG2Q5D862 2391 aaPredicted RBP1.52□□□□□ -2.17
SPARCL1-208ENST00000535835 NAV3Q8IVL0 2385 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms