RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 A4D1N5 150 aa9.84□□□□□ -0.83
ATL3-202ENST00000535789 VPREB1P12018 145 aa9.84□□□□□ -0.83
ATL3-202ENST00000535789 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
ATL3-202ENST00000535789 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
ATL3-202ENST00000535789 RPL37AP8A6NKH3 93 aa9.83□□□□□ -0.84
ATL3-202ENST00000535789 NDUFC2O95298 119 aa9.83□□□□□ -0.84
ATL3-202ENST00000535789 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
ATL3-202ENST00000535789 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
ATL3-202ENST00000535789 LBHQ53QV2 105 aaPredicted RBP9.82□□□□□ -0.84
ATL3-202ENST00000535789 LPAP08519 4548 aa9.82□□□□□ -0.84
ATL3-202ENST00000535789 M0R143 59 aa9.81□□□□□ -0.84
ATL3-202ENST00000535789 ZNF861PO60384 105 aa9.81□□□□□ -0.84
ATL3-202ENST00000535789 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
ATL3-202ENST00000535789 A6NJY4 79 aa9.8□□□□□ -0.84
ATL3-202ENST00000535789 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
ATL3-202ENST00000535789 BCE1O60756 84 aa9.79□□□□□ -0.84
ATL3-202ENST00000535789 CFC1BP0CG36 223 aa9.79□□□□□ -0.84
ATL3-202ENST00000535789 CFC1P0CG37 223 aa9.79□□□□□ -0.84
ATL3-202ENST00000535789 A0A1B0GWB2 263 aa9.78□□□□□ -0.84
ATL3-202ENST00000535789 NCR3O14931 201 aa9.78□□□□□ -0.84
ATL3-202ENST00000535789 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
ATL3-202ENST00000535789 A0A0B4J2C4 111 aa9.77□□□□□ -0.85
ATL3-202ENST00000535789 TRBV10-2A0A0K0K1G8 114 aa9.77□□□□□ -0.85
ATL3-202ENST00000535789 NKAPP1Q8N9T2 125 aa9.77□□□□□ -0.85
ATL3-202ENST00000535789 SNHG12Q9BXW3 62 aa9.77□□□□□ -0.85
ATL3-202ENST00000535789 NHP2Q9NX24 153 aaKnown RBP9.77□□□□□ -0.85
ATL3-202ENST00000535789 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
ATL3-202ENST00000535789 K7ERJ3 54 aa9.75□□□□□ -0.85
ATL3-202ENST00000535789 M0R378 163 aa9.75□□□□□ -0.85
ATL3-202ENST00000535789 BATFQ16520 125 aa9.75□□□□□ -0.85
ATL3-202ENST00000535789 A0A087X002 238 aa9.73□□□□□ -0.85
ATL3-202ENST00000535789 TRAV13-2A0A0B4J235 113 aa9.73□□□□□ -0.85
ATL3-202ENST00000535789 A6NDN8 102 aa9.73□□□□□ -0.85
ATL3-202ENST00000535789 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
ATL3-202ENST00000535789 RAB37Q96AX2 223 aa9.72□□□□□ -0.85
ATL3-202ENST00000535789 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
ATL3-202ENST00000535789 RPL13AP40429 203 aaKnown RBP9.71□□□□□ -0.86
ATL3-202ENST00000535789 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.86
ATL3-202ENST00000535789 TMEM126AQ9H061 195 aa9.71□□□□□ -0.86
ATL3-202ENST00000535789 PRLHP81277 87 aa9.7□□□□□ -0.86
ATL3-202ENST00000535789 PRO1854Q9UHT4 67 aa9.7□□□□□ -0.86
ATL3-202ENST00000535789 S100A7L2Q5SY68 101 aa9.69□□□□□ -0.86
ATL3-202ENST00000535789 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
ATL3-202ENST00000535789 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
ATL3-202ENST00000535789 RNF213Q63HN8 5207 aa9.68□□□□□ -0.86
ATL3-202ENST00000535789 TSPAN13O95857 204 aa9.66□□□□□ -0.86
ATL3-202ENST00000535789 UBE2AP49459 152 aa9.66□□□□□ -0.86
ATL3-202ENST00000535789 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
ATL3-202ENST00000535789 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
ATL3-202ENST00000535789 H7C2G1 150 aa9.65□□□□□ -0.86
ATL3-202ENST00000535789 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.86
ATL3-202ENST00000535789 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
ATL3-202ENST00000535789 KCNQ1DNQ9H478 68 aa9.65□□□□□ -0.86
ATL3-202ENST00000535789 PRYO14603 147 aa9.64□□□□□ -0.87
ATL3-202ENST00000535789 TAX1BP3O14907 124 aa9.64□□□□□ -0.87
ATL3-202ENST00000535789 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
ATL3-202ENST00000535789 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
ATL3-202ENST00000535789 SPRR1AP35321 89 aa9.61□□□□□ -0.87
ATL3-202ENST00000535789 Q1RN00 199 aa9.61□□□□□ -0.87
ATL3-202ENST00000535789 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
ATL3-202ENST00000535789 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
ATL3-202ENST00000535789 TRIAP1O43715 76 aa9.59□□□□□ -0.87
ATL3-202ENST00000535789 CRYGAP11844 174 aa9.59□□□□□ -0.87
ATL3-202ENST00000535789 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
ATL3-202ENST00000535789 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
ATL3-202ENST00000535789 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
ATL3-202ENST00000535789 FAM229BQ4G0N7 80 aa9.57□□□□□ -0.88
ATL3-202ENST00000535789 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
ATL3-202ENST00000535789 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
ATL3-202ENST00000535789 H3BUT2 72 aa9.56□□□□□ -0.88
ATL3-202ENST00000535789 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
ATL3-202ENST00000535789 PSMB2P49721 201 aa9.55□□□□□ -0.88
ATL3-202ENST00000535789 B5MCH6 92 aa9.54□□□□□ -0.88
ATL3-202ENST00000535789 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
ATL3-202ENST00000535789 C3orf22Q8N5N4 141 aa9.54□□□□□ -0.88
ATL3-202ENST00000535789 ETDCA0A1B0GVM5 59 aa9.53□□□□□ -0.88
ATL3-202ENST00000535789 COX7BP24311 80 aa9.53□□□□□ -0.88
ATL3-202ENST00000535789 SMCR5Q8TEV8 140 aa9.53□□□□□ -0.88
ATL3-202ENST00000535789 SPRR4Q96PI1 79 aa9.53□□□□□ -0.88
ATL3-202ENST00000535789 A0A1W2PPM0 123 aa9.52□□□□□ -0.89
ATL3-202ENST00000535789 Q6ZRX8 168 aa9.52□□□□□ -0.89
ATL3-202ENST00000535789 H0YGX0 51 aa9.5□□□□□ -0.89
ATL3-202ENST00000535789 COX6CP09669 75 aa9.5□□□□□ -0.89
ATL3-202ENST00000535789 VAMP3Q15836 100 aa9.5□□□□□ -0.89
ATL3-202ENST00000535789 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
ATL3-202ENST00000535789 FAM218AQ96MZ4 157 aa9.5□□□□□ -0.89
ATL3-202ENST00000535789 PRR4Q16378 134 aa9.49□□□□□ -0.89
ATL3-202ENST00000535789 Q9BRP9 147 aa9.49□□□□□ -0.89
ATL3-202ENST00000535789 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
ATL3-202ENST00000535789 SCGB1C2P0DMR2 95 aa9.48□□□□□ -0.89
ATL3-202ENST00000535789 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
ATL3-202ENST00000535789 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
ATL3-202ENST00000535789 FABP2P12104 132 aa9.47□□□□□ -0.89
ATL3-202ENST00000535789 LYRM7Q5U5X0 104 aa9.47□□□□□ -0.89
ATL3-202ENST00000535789 TCL1BO95988 128 aa9.46□□□□□ -0.9
ATL3-202ENST00000535789 RETNLBQ9BQ08 111 aa9.46□□□□□ -0.9
ATL3-202ENST00000535789 LST1O00453 97 aa9.45□□□□□ -0.9
ATL3-202ENST00000535789 DHRS4-AS1Q9P1J3 65 aa9.45□□□□□ -0.9
ATL3-202ENST00000535789 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
ATL3-202ENST00000535789 A0A1B0GX51 115 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms