RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
CAPN1-223ENST00000533079 UBE2V1Q13404 147 aa7.41□□□□□ -1.22
CAPN1-223ENST00000533079 RAB37Q96AX2 223 aa7.41□□□□□ -1.22
CAPN1-223ENST00000533079 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
CAPN1-223ENST00000533079 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
CAPN1-223ENST00000533079 FABP2P12104 132 aa7.4□□□□□ -1.22
CAPN1-223ENST00000533079 VAMP3Q15836 100 aa7.4□□□□□ -1.22
CAPN1-223ENST00000533079 LINC00158P58513 81 aa7.39□□□□□ -1.23
CAPN1-223ENST00000533079 GTF2H5Q6ZYL4 71 aa7.39□□□□□ -1.23
CAPN1-223ENST00000533079 MIR7-3HGQ8N6C7 128 aa7.39□□□□□ -1.23
CAPN1-223ENST00000533079 TRBV30A0A0K0K1B3 111 aa7.38□□□□□ -1.23
CAPN1-223ENST00000533079 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
CAPN1-223ENST00000533079 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
CAPN1-223ENST00000533079 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
CAPN1-223ENST00000533079 KRTAP11-1Q8IUC1 163 aa7.38□□□□□ -1.23
CAPN1-223ENST00000533079 GAGE10A6NGK3 116 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 K7EP34 96 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 M0QXV9 152 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 TSPAN13O95857 204 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 UBE2BP63146 152 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
CAPN1-223ENST00000533079 DAND5Q8N907 189 aa7.37□□□□□ -1.23
CAPN1-223ENST00000533079 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
CAPN1-223ENST00000533079 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 NDUFC2O95298 119 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 PFN2P35080 140 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 SPCS1Q9Y6A9 102 aa7.35□□□□□ -1.23
CAPN1-223ENST00000533079 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
CAPN1-223ENST00000533079 ZNF861PO60384 105 aa7.34□□□□□ -1.23
CAPN1-223ENST00000533079 TPRXLQ17RH7 258 aa7.34□□□□□ -1.23
CAPN1-223ENST00000533079 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
CAPN1-223ENST00000533079 NPC2P61916 151 aa7.33□□□□□ -1.24
CAPN1-223ENST00000533079 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
CAPN1-223ENST00000533079 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
CAPN1-223ENST00000533079 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
CAPN1-223ENST00000533079 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
CAPN1-223ENST00000533079 COX6CP09669 75 aa7.31□□□□□ -1.24
CAPN1-223ENST00000533079 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
CAPN1-223ENST00000533079 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
CAPN1-223ENST00000533079 KRTAP7-1Q8IUC3 87 aa7.31□□□□□ -1.24
CAPN1-223ENST00000533079 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
CAPN1-223ENST00000533079 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
CAPN1-223ENST00000533079 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
CAPN1-223ENST00000533079 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
CAPN1-223ENST00000533079 SCGB1C2P0DMR2 95 aa7.3□□□□□ -1.24
CAPN1-223ENST00000533079 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
CAPN1-223ENST00000533079 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
CAPN1-223ENST00000533079 F8W1H4 67 aa7.29□□□□□ -1.24
CAPN1-223ENST00000533079 CRYGAP11844 174 aa7.29□□□□□ -1.24
CAPN1-223ENST00000533079 Q1RN00 199 aa7.29□□□□□ -1.24
CAPN1-223ENST00000533079 A0A087X002 238 aa7.28□□□□□ -1.24
CAPN1-223ENST00000533079 TRBV10-2A0A0K0K1G8 114 aa7.28□□□□□ -1.24
CAPN1-223ENST00000533079 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
CAPN1-223ENST00000533079 PSMB2P49721 201 aa7.28□□□□□ -1.24
CAPN1-223ENST00000533079 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
CAPN1-223ENST00000533079 TRIAP1O43715 76 aa7.27□□□□□ -1.25
CAPN1-223ENST00000533079 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
CAPN1-223ENST00000533079 H7C2G1 150 aa7.26□□□□□ -1.25
CAPN1-223ENST00000533079 TCL1BO95988 128 aa7.26□□□□□ -1.25
CAPN1-223ENST00000533079 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
CAPN1-223ENST00000533079 TMEM126AQ9H061 195 aa7.26□□□□□ -1.25
CAPN1-223ENST00000533079 H3BMG7 143 aa7.25□□□□□ -1.25
CAPN1-223ENST00000533079 ATXN8Q156A1 80 aa7.25□□□□□ -1.25
CAPN1-223ENST00000533079 H0YGX0 51 aa7.24□□□□□ -1.25
CAPN1-223ENST00000533079 PRO0461Q9UI25 63 aa7.24□□□□□ -1.25
CAPN1-223ENST00000533079 BCE1O60756 84 aa7.23□□□□□ -1.25
CAPN1-223ENST00000533079 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
CAPN1-223ENST00000533079 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
CAPN1-223ENST00000533079 LST1O00453 97 aa7.22□□□□□ -1.25
CAPN1-223ENST00000533079 LINC01547P58512 204 aaPredicted RBP7.22□□□□□ -1.25
CAPN1-223ENST00000533079 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
CAPN1-223ENST00000533079 SMIM11BQ8TCY0 68 aa7.22□□□□□ -1.25
CAPN1-223ENST00000533079 CBY1Q9Y3M2 126 aa7.22□□□□□ -1.25
CAPN1-223ENST00000533079 IGLV6-57P01721 117 aa7.21□□□□□ -1.26
CAPN1-223ENST00000533079 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
CAPN1-223ENST00000533079 OR13C6PQ8NH95 151 aa7.21□□□□□ -1.26
CAPN1-223ENST00000533079 C22orf24Q9Y442 160 aa7.21□□□□□ -1.26
CAPN1-223ENST00000533079 M0R378 163 aa7.2□□□□□ -1.26
CAPN1-223ENST00000533079 TRACP01848 142 aa7.2□□□□□ -1.26
CAPN1-223ENST00000533079 VPREB1P12018 145 aa7.2□□□□□ -1.26
CAPN1-223ENST00000533079 Q8NDZ9 215 aa7.2□□□□□ -1.26
CAPN1-223ENST00000533079 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
CAPN1-223ENST00000533079 A0A1B0GX51 115 aa7.19□□□□□ -1.26
CAPN1-223ENST00000533079 KRTAP13-2Q52LG2 175 aa7.19□□□□□ -1.26
CAPN1-223ENST00000533079 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
CAPN1-223ENST00000533079 XAGE1AQ9HD64 81 aa7.19□□□□□ -1.26
CAPN1-223ENST00000533079 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
CAPN1-223ENST00000533079 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
CAPN1-223ENST00000533079 TRBV7-6A0A0J9YX20 115 aa7.17□□□□□ -1.26
CAPN1-223ENST00000533079 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
CAPN1-223ENST00000533079 H3BT86 120 aa7.16□□□□□ -1.26
CAPN1-223ENST00000533079 SLC25A20O43772 301 aa7.16□□□□□ -1.26
CAPN1-223ENST00000533079 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
CAPN1-223ENST00000533079 C9JAW5 83 aa7.15□□□□□ -1.26
CAPN1-223ENST00000533079 NCR3O14931 201 aa7.15□□□□□ -1.26
CAPN1-223ENST00000533079 FP248Q71RG6 208 aaPredicted RBP7.15□□□□□ -1.26
CAPN1-223ENST00000533079 ANKRD29Q8N6D5 301 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms