RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
CPSF1-210ENST00000532935 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
CPSF1-210ENST00000532935 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
CPSF1-210ENST00000532935 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
CPSF1-210ENST00000532935 LITAFQ99732 161 aa9.24□□□□□ -0.93
CPSF1-210ENST00000532935 IGLV1-50A0A075B6I6 118 aa9.23□□□□□ -0.93
CPSF1-210ENST00000532935 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
CPSF1-210ENST00000532935 FXYD2P54710 66 aa9.23□□□□□ -0.93
CPSF1-210ENST00000532935 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
CPSF1-210ENST00000532935 KRTAP13-1Q8IUC0 172 aa9.21□□□□□ -0.94
CPSF1-210ENST00000532935 UBE2AP49459 152 aa9.2□□□□□ -0.94
CPSF1-210ENST00000532935 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
CPSF1-210ENST00000532935 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
CPSF1-210ENST00000532935 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
CPSF1-210ENST00000532935 M0R378 163 aa9.18□□□□□ -0.94
CPSF1-210ENST00000532935 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
CPSF1-210ENST00000532935 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
CPSF1-210ENST00000532935 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
CPSF1-210ENST00000532935 A0A0B4J2C4 111 aa9.16□□□□□ -0.94
CPSF1-210ENST00000532935 C9orf118A6NHY6 69 aa9.16□□□□□ -0.94
CPSF1-210ENST00000532935 RPL13AP40429 203 aaKnown RBP9.16□□□□□ -0.94
CPSF1-210ENST00000532935 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
CPSF1-210ENST00000532935 DAND5Q8N907 189 aa9.16□□□□□ -0.94
CPSF1-210ENST00000532935 A4D1N5 150 aa9.15□□□□□ -0.94
CPSF1-210ENST00000532935 NCR3O14931 201 aa9.15□□□□□ -0.94
CPSF1-210ENST00000532935 PRLHP81277 87 aa9.15□□□□□ -0.94
CPSF1-210ENST00000532935 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
CPSF1-210ENST00000532935 LRP2P98164 4655 aa9.14□□□□□ -0.95
CPSF1-210ENST00000532935 LOC107984156A0A0G2JMH3 177 aa9.14□□□□□ -0.95
CPSF1-210ENST00000532935 A0A1B0GV90 55 aa9.14□□□□□ -0.95
CPSF1-210ENST00000532935 ARL17AQ8IVW1 177 aa9.14□□□□□ -0.95
CPSF1-210ENST00000532935 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
CPSF1-210ENST00000532935 CFC1P0CG37 223 aa9.13□□□□□ -0.95
CPSF1-210ENST00000532935 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
CPSF1-210ENST00000532935 A0A087X002 238 aa9.11□□□□□ -0.95
CPSF1-210ENST00000532935 PRYO14603 147 aa9.11□□□□□ -0.95
CPSF1-210ENST00000532935 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
CPSF1-210ENST00000532935 CRYGAP11844 174 aa9.1□□□□□ -0.95
CPSF1-210ENST00000532935 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
CPSF1-210ENST00000532935 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
CPSF1-210ENST00000532935 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
CPSF1-210ENST00000532935 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
CPSF1-210ENST00000532935 H3BUT2 72 aa9.08□□□□□ -0.96
CPSF1-210ENST00000532935 K7ERJ3 54 aa9.08□□□□□ -0.96
CPSF1-210ENST00000532935 SPRR1AP35321 89 aa9.08□□□□□ -0.96
CPSF1-210ENST00000532935 LYRM7Q5U5X0 104 aa9.08□□□□□ -0.96
CPSF1-210ENST00000532935 A0A1W2PPM0 123 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 NDUFC2O95298 119 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 FABP2P12104 132 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 NPC2P61916 151 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 SOSTDC1Q6X4U4 206 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 LINC00337Q8N6G1 96 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 HIGD2AQ9BW72 106 aa9.07□□□□□ -0.96
CPSF1-210ENST00000532935 VAMP3Q15836 100 aa9.06□□□□□ -0.96
CPSF1-210ENST00000532935 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
CPSF1-210ENST00000532935 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
CPSF1-210ENST00000532935 ETDCA0A1B0GVM5 59 aa9.05□□□□□ -0.96
CPSF1-210ENST00000532935 KRTAP4-16G5E9R7 235 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-210ENST00000532935 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-210ENST00000532935 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
CPSF1-210ENST00000532935 GTF2H5Q6ZYL4 71 aa9.05□□□□□ -0.96
CPSF1-210ENST00000532935 TSPAN13O95857 204 aa9.04□□□□□ -0.96
CPSF1-210ENST00000532935 LPAP08519 4548 aa9.03□□□□□ -0.96
CPSF1-210ENST00000532935 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
CPSF1-210ENST00000532935 S100A7L2Q5SY68 101 aa9.03□□□□□ -0.96
CPSF1-210ENST00000532935 IGLV6-57P01721 117 aa9.02□□□□□ -0.97
CPSF1-210ENST00000532935 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
CPSF1-210ENST00000532935 K7EP34 96 aa9.01□□□□□ -0.97
CPSF1-210ENST00000532935 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
CPSF1-210ENST00000532935 B5MCH6 92 aa9□□□□□ -0.97
CPSF1-210ENST00000532935 COX6CP09669 75 aa9□□□□□ -0.97
CPSF1-210ENST00000532935 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
CPSF1-210ENST00000532935 ZNF706Q9Y5V0 76 aaPredicted RBP9□□□□□ -0.97
CPSF1-210ENST00000532935 SPCS1Q9Y6A9 102 aa9□□□□□ -0.97
CPSF1-210ENST00000532935 Q1RN00 199 aa8.99□□□□□ -0.97
CPSF1-210ENST00000532935 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
CPSF1-210ENST00000532935 PSMB2P49721 201 aa8.97□□□□□ -0.97
CPSF1-210ENST00000532935 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
CPSF1-210ENST00000532935 NAA38Q9BRA0 125 aaKnown RBP8.97□□□□□ -0.97
CPSF1-210ENST00000532935 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.98
CPSF1-210ENST00000532935 Q6ZRX8 168 aa8.96□□□□□ -0.98
CPSF1-210ENST00000532935 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
CPSF1-210ENST00000532935 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
CPSF1-210ENST00000532935 PRR4Q16378 134 aa8.95□□□□□ -0.98
CPSF1-210ENST00000532935 Q9BRP9 147 aa8.95□□□□□ -0.98
CPSF1-210ENST00000532935 CBY1Q9Y3M2 126 aa8.95□□□□□ -0.98
CPSF1-210ENST00000532935 H7C2G1 150 aa8.94□□□□□ -0.98
CPSF1-210ENST00000532935 ERC2-IT1O76042 136 aa8.94□□□□□ -0.98
CPSF1-210ENST00000532935 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
CPSF1-210ENST00000532935 RNF213Q63HN8 5207 aa8.94□□□□□ -0.98
CPSF1-210ENST00000532935 TRIAP1O43715 76 aa8.93□□□□□ -0.98
CPSF1-210ENST00000532935 LINC00483Q53H64 154 aa8.92□□□□□ -0.98
CPSF1-210ENST00000532935 ATXN8Q156A1 80 aa8.91□□□□□ -0.98
CPSF1-210ENST00000532935 GAGE2AQ6NT46 116 aa8.91□□□□□ -0.98
CPSF1-210ENST00000532935 F8W1H4 67 aa8.9□□□□□ -0.98
CPSF1-210ENST00000532935 H0YGX0 51 aa8.9□□□□□ -0.98
CPSF1-210ENST00000532935 TCL1BO95988 128 aa8.89□□□□□ -0.99
CPSF1-210ENST00000532935 SMIM11BQ8TCY0 68 aa8.88□□□□□ -0.99
CPSF1-210ENST00000532935 H3BMG7 143 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms