RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 Q6ZRX8 168 aa1.61□□□□□ -2.15
PTPRK-220ENST00000531466 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 BRWD1Q9NSI6 2320 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 IGKV2-24A0A0C4DH68 120 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 LINC01590Q5TEZ4 76 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 TTTY10Q9BZA0 68 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 ZFHX2Q9C0A1 2572 aaPredicted RBP1.6□□□□□ -2.15
PTPRK-220ENST00000531466 TNCP24821 2201 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 UNC13CQ8NB66 2214 aa1.6□□□□□ -2.15
PTPRK-220ENST00000531466 TENM1Q9UKZ4 2725 aa1.59□□□□□ -2.15
PTPRK-220ENST00000531466 SPINK13Q1W4C9 94 aa1.59□□□□□ -2.15
PTPRK-220ENST00000531466 PIEZO1Q92508 2521 aa1.59□□□□□ -2.16
PTPRK-220ENST00000531466 RP1P56715 2156 aa1.58□□□□□ -2.16
PTPRK-220ENST00000531466 GVQW2A0A096LPI5 108 aaPredicted RBP1.58□□□□□ -2.16
PTPRK-220ENST00000531466 G3V318 75 aa1.58□□□□□ -2.16
PTPRK-220ENST00000531466 TP53AIP1Q9HCN2 124 aa1.58□□□□□ -2.16
PTPRK-220ENST00000531466 CEP192Q8TEP8 1941 aa1.58□□□□□ -2.16
PTPRK-220ENST00000531466 FREM1Q5H8C1 2179 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 A0A096LNT2 108 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 LYNX1G3V0Z9 82 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 CRIP1P50238 77 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
PTPRK-220ENST00000531466 USP9XQ93008 2570 aaPredicted RBP1.56□□□□□ -2.16
PTPRK-220ENST00000531466 LOC730098B7Z3J9 87 aa1.56□□□□□ -2.16
PTPRK-220ENST00000531466 PRB1P04280 392 aa1.56□□□□□ -2.16
PTPRK-220ENST00000531466 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
PTPRK-220ENST00000531466 MED13LQ71F56 2210 aa1.56□□□□□ -2.16
PTPRK-220ENST00000531466 USMG5Q96IX5 58 aa1.55□□□□□ -2.16
PTPRK-220ENST00000531466 CRIPTQ9P021 101 aa1.55□□□□□ -2.16
PTPRK-220ENST00000531466 GOLGA4Q13439 2230 aaKnown RBP1.55□□□□□ -2.16
PTPRK-220ENST00000531466 UTRNP46939 3433 aa1.54□□□□□ -2.16
PTPRK-220ENST00000531466 K7EQZ3 153 aa1.54□□□□□ -2.16
PTPRK-220ENST00000531466 CCL22O00626 93 aa1.54□□□□□ -2.16
PTPRK-220ENST00000531466 POLR2KP53803 58 aaKnown RBP1.54□□□□□ -2.16
PTPRK-220ENST00000531466 MINOS1Q5TGZ0 78 aa1.54□□□□□ -2.16
PTPRK-220ENST00000531466 Q6ZRN7 208 aaPredicted RBP1.54□□□□□ -2.16
PTPRK-220ENST00000531466 FLNBO75369 2602 aaKnown RBP1.54□□□□□ -2.16
PTPRK-220ENST00000531466 ANKRD11Q6UB99 2663 aaPredicted RBP1.54□□□□□ -2.16
PTPRK-220ENST00000531466 PCNTO95613 3336 aa1.54□□□□□ -2.16
PTPRK-220ENST00000531466 BDP1A6H8Y1 2624 aa1.53□□□□□ -2.16
PTPRK-220ENST00000531466 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.16
PTPRK-220ENST00000531466 C6orf48Q9UBA6 75 aa1.53□□□□□ -2.16
PTPRK-220ENST00000531466 CACNA1BQ00975 2339 aa1.52□□□□□ -2.17
PTPRK-220ENST00000531466 ALPK2Q86TB3 2170 aa1.52□□□□□ -2.17
PTPRK-220ENST00000531466 PRCDQ00LT1 54 aa1.52□□□□□ -2.17
PTPRK-220ENST00000531466 BPTFQ12830 3046 aa1.51□□□□□ -2.17
PTPRK-220ENST00000531466 F5P12259 2224 aa1.51□□□□□ -2.17
PTPRK-220ENST00000531466 SETXQ7Z333 2677 aaKnown RBP1.51□□□□□ -2.17
PTPRK-220ENST00000531466 MAST4O15021 2626 aa1.51□□□□□ -2.17
PTPRK-220ENST00000531466 RPL37P61927 97 aaKnown RBP1.51□□□□□ -2.17
PTPRK-220ENST00000531466 PRB3Q04118 309 aaPredicted RBP1.51□□□□□ -2.17
PTPRK-220ENST00000531466 PRO3102Q9H379 93 aa1.51□□□□□ -2.17
PTPRK-220ENST00000531466 NAV2Q8IVL1 2488 aa1.51□□□□□ -2.17
PTPRK-220ENST00000531466 FASNP49327 2511 aaKnown RBP1.5□□□□□ -2.17
PTPRK-220ENST00000531466 PTPN13Q12923 2485 aa1.5□□□□□ -2.17
PTPRK-220ENST00000531466 H3BSH0 61 aa1.5□□□□□ -2.17
PTPRK-220ENST00000531466 RPL39P62891 51 aaKnown RBP1.5□□□□□ -2.17
PTPRK-220ENST00000531466 PIGYQ3MUY2 71 aa1.5□□□□□ -2.17
PTPRK-220ENST00000531466 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
PTPRK-220ENST00000531466 ANKRD17O75179 2603 aaKnown RBP1.49□□□□□ -2.17
PTPRK-220ENST00000531466 IGLV5-48A0A075B6I7 105 aa1.49□□□□□ -2.17
PTPRK-220ENST00000531466 UNQ6190/PRO20217Q6UXQ8 127 aa1.49□□□□□ -2.17
PTPRK-220ENST00000531466 RPL39LQ96EH5 51 aaKnown RBP1.49□□□□□ -2.17
PTPRK-220ENST00000531466 CACNA1CQ13936 2221 aa1.49□□□□□ -2.17
PTPRK-220ENST00000531466 RTTNQ86VV8 2226 aa1.49□□□□□ -2.17
PTPRK-220ENST00000531466 SZT2Q5T011 3432 aa1.49□□□□□ -2.17
PTPRK-220ENST00000531466 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
PTPRK-220ENST00000531466 CHD6Q8TD26 2715 aa1.48□□□□□ -2.17
PTPRK-220ENST00000531466 TNRC18O15417 2968 aaPredicted RBP1.47□□□□□ -2.17
PTPRK-220ENST00000531466 DEFB131AP59861 70 aa1.47□□□□□ -2.17
PTPRK-220ENST00000531466 SPINK9Q5DT21 86 aa1.47□□□□□ -2.17
PTPRK-220ENST00000531466 DEFB123Q8N688 67 aa1.47□□□□□ -2.17
PTPRK-220ENST00000531466 ZNF462Q96JM2 2506 aa1.46□□□□□ -2.18
PTPRK-220ENST00000531466 KNTC1P50748 2209 aa1.46□□□□□ -2.18
PTPRK-220ENST00000531466 RPS27P42677 84 aaKnown RBP1.46□□□□□ -2.18
PTPRK-220ENST00000531466 WFDC10BQ8IUB3 73 aa1.46□□□□□ -2.18
PTPRK-220ENST00000531466 WFDC13Q8IUB5 93 aa1.46□□□□□ -2.18
PTPRK-220ENST00000531466 USP24Q9UPU5 2620 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 H0YAA0 97 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 I3L2K1 104 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 LYNX1P0DP58 116 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 ABCA12Q86UK0 2595 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 EPG5Q9HCE0 2579 aa1.45□□□□□ -2.18
PTPRK-220ENST00000531466 DOPEY1Q5JWR5 2465 aa1.44□□□□□ -2.18
PTPRK-220ENST00000531466 CACNA1EQ15878 2313 aa1.44□□□□□ -2.18
PTPRK-220ENST00000531466 URB1O60287 2271 aaKnown RBP1.43□□□□□ -2.18
PTPRK-220ENST00000531466 TTC28Q96AY4 2481 aa1.43□□□□□ -2.18
PTPRK-220ENST00000531466 M0QY20 66 aa1.43□□□□□ -2.18
PTPRK-220ENST00000531466 COL6A3P12111 3177 aa1.43□□□□□ -2.18
PTPRK-220ENST00000531466 ABCA1O95477 2261 aa1.43□□□□□ -2.18
PTPRK-220ENST00000531466 FN1P02751 2386 aaKnown RBP1.43□□□□□ -2.18
PTPRK-220ENST00000531466 TPRP12270 2363 aaKnown RBP1.42□□□□□ -2.18
PTPRK-220ENST00000531466 ZDBF2Q9HCK1 2354 aa1.42□□□□□ -2.18
PTPRK-220ENST00000531466 ZNF292O60281 2723 aa1.42□□□□□ -2.18
PTPRK-220ENST00000531466 CADP27708 2225 aa1.42□□□□□ -2.18
PTPRK-220ENST00000531466 GCN1Q92616 2671 aaKnown RBP1.42□□□□□ -2.18
PTPRK-220ENST00000531466 H3BUA1 57 aa1.42□□□□□ -2.18
PTPRK-220ENST00000531466 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms