RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 PRYO14603 147 aa10.72□□□□□ -0.69
PTPN11-204ENST00000531326 KRTAP13-1Q8IUC0 172 aa10.72□□□□□ -0.69
PTPN11-204ENST00000531326 ZNF861PO60384 105 aa10.71□□□□□ -0.69
PTPN11-204ENST00000531326 C2orf91Q6ZV80 131 aa10.71□□□□□ -0.69
PTPN11-204ENST00000531326 LOC105371267A0A1B0GV96 52 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 KRTAP1-4P0C5Y4 121 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 SPRR1AP35321 89 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 S100A7L2Q5SY68 101 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 HIGD1BQ9P298 99 aa10.7□□□□□ -0.7
PTPN11-204ENST00000531326 LINC00518Q8N0U6 118 aa10.69□□□□□ -0.7
PTPN11-204ENST00000531326 KRTAP4-16G5E9R7 235 aaPredicted RBP10.68□□□□□ -0.7
PTPN11-204ENST00000531326 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
PTPN11-204ENST00000531326 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
PTPN11-204ENST00000531326 UBE2AP49459 152 aa10.67□□□□□ -0.7
PTPN11-204ENST00000531326 S100A12P80511 92 aa10.67□□□□□ -0.7
PTPN11-204ENST00000531326 PRLHP81277 87 aa10.67□□□□□ -0.7
PTPN11-204ENST00000531326 HIST1H4GQ99525 98 aa10.67□□□□□ -0.7
PTPN11-204ENST00000531326 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.7
PTPN11-204ENST00000531326 A4D1N5 150 aa10.65□□□□□ -0.7
PTPN11-204ENST00000531326 SMIM6P0DI80 62 aa10.65□□□□□ -0.7
PTPN11-204ENST00000531326 OR13C6PQ8NH95 151 aa10.65□□□□□ -0.7
PTPN11-204ENST00000531326 MUC2Q02817 5179 aa10.62□□□□□ -0.71
PTPN11-204ENST00000531326 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
PTPN11-204ENST00000531326 B5MCH6 92 aa10.61□□□□□ -0.71
PTPN11-204ENST00000531326 ZNF73O43830 326 aaPredicted RBP10.61□□□□□ -0.71
PTPN11-204ENST00000531326 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
PTPN11-204ENST00000531326 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
PTPN11-204ENST00000531326 A6NDN8 102 aa10.6□□□□□ -0.71
PTPN11-204ENST00000531326 TAL2Q16559 108 aa10.6□□□□□ -0.71
PTPN11-204ENST00000531326 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
PTPN11-204ENST00000531326 C12orf57Q99622 126 aa10.58□□□□□ -0.72
PTPN11-204ENST00000531326 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
PTPN11-204ENST00000531326 PRR4Q16378 134 aa10.57□□□□□ -0.72
PTPN11-204ENST00000531326 Q6ZRX8 168 aa10.57□□□□□ -0.72
PTPN11-204ENST00000531326 CEND1Q8N111 149 aa10.57□□□□□ -0.72
PTPN11-204ENST00000531326 SMCR5Q8TEV8 140 aa10.57□□□□□ -0.72
PTPN11-204ENST00000531326 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
PTPN11-204ENST00000531326 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
PTPN11-204ENST00000531326 C6orf99Q4VX62 202 aa10.55□□□□□ -0.72
PTPN11-204ENST00000531326 Q9BRP9 147 aa10.55□□□□□ -0.72
PTPN11-204ENST00000531326 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
PTPN11-204ENST00000531326 CFC1P0CG37 223 aa10.54□□□□□ -0.72
PTPN11-204ENST00000531326 HSD52Q0P140 79 aa10.54□□□□□ -0.72
PTPN11-204ENST00000531326 FXYD2P54710 66 aa10.53□□□□□ -0.72
PTPN11-204ENST00000531326 SMIM11BQ8TCY0 68 aa10.53□□□□□ -0.72
PTPN11-204ENST00000531326 ERC2-IT1O76042 136 aa10.52□□□□□ -0.73
PTPN11-204ENST00000531326 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.73
PTPN11-204ENST00000531326 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
PTPN11-204ENST00000531326 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
PTPN11-204ENST00000531326 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
PTPN11-204ENST00000531326 COX7BP24311 80 aa10.5□□□□□ -0.73
PTPN11-204ENST00000531326 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
PTPN11-204ENST00000531326 SPRR4Q96PI1 79 aa10.49□□□□□ -0.73
PTPN11-204ENST00000531326 A0A087X002 238 aa10.48□□□□□ -0.73
PTPN11-204ENST00000531326 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
PTPN11-204ENST00000531326 A6NJY4 79 aa10.48□□□□□ -0.73
PTPN11-204ENST00000531326 TSPAN13O95857 204 aa10.48□□□□□ -0.73
PTPN11-204ENST00000531326 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
PTPN11-204ENST00000531326 A0A1B0GWB2 263 aa10.47□□□□□ -0.73
PTPN11-204ENST00000531326 ZNF706Q9Y5V0 76 aaPredicted RBP10.46□□□□□ -0.73
PTPN11-204ENST00000531326 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
PTPN11-204ENST00000531326 DHRS4-AS1Q9P1J3 65 aa10.45□□□□□ -0.74
PTPN11-204ENST00000531326 H7C2G1 150 aa10.43□□□□□ -0.74
PTPN11-204ENST00000531326 CRYGAP11844 174 aa10.43□□□□□ -0.74
PTPN11-204ENST00000531326 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
PTPN11-204ENST00000531326 NHP2Q9NX24 153 aaKnown RBP10.43□□□□□ -0.74
PTPN11-204ENST00000531326 PRO1854Q9UHT4 67 aa10.43□□□□□ -0.74
PTPN11-204ENST00000531326 TSTD3H0UI37 97 aa10.42□□□□□ -0.74
PTPN11-204ENST00000531326 CTAG1AP78358 180 aa10.42□□□□□ -0.74
PTPN11-204ENST00000531326 KRTAP13-2Q52LG2 175 aa10.42□□□□□ -0.74
PTPN11-204ENST00000531326 LINC00483Q53H64 154 aa10.42□□□□□ -0.74
PTPN11-204ENST00000531326 ST20-AS1Q8NBB2 130 aa10.42□□□□□ -0.74
PTPN11-204ENST00000531326 TYMSOSQ8TAI1 123 aa10.41□□□□□ -0.74
PTPN11-204ENST00000531326 K7ERJ3 54 aa10.4□□□□□ -0.74
PTPN11-204ENST00000531326 VAMP3Q15836 100 aa10.4□□□□□ -0.74
PTPN11-204ENST00000531326 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
PTPN11-204ENST00000531326 LINC00575Q6W349 94 aa10.38□□□□□ -0.75
PTPN11-204ENST00000531326 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
PTPN11-204ENST00000531326 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
PTPN11-204ENST00000531326 Q1RN00 199 aa10.36□□□□□ -0.75
PTPN11-204ENST00000531326 FAT4Q6V0I7 4981 aa10.36□□□□□ -0.75
PTPN11-204ENST00000531326 SPRR1BP22528 89 aa10.35□□□□□ -0.75
PTPN11-204ENST00000531326 KRTAP9-2Q9BYQ4 174 aa10.35□□□□□ -0.75
PTPN11-204ENST00000531326 LCE2AQ5TA79 106 aaPredicted RBP10.34□□□□□ -0.75
PTPN11-204ENST00000531326 M0R143 59 aa10.33□□□□□ -0.76
PTPN11-204ENST00000531326 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
PTPN11-204ENST00000531326 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
PTPN11-204ENST00000531326 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
PTPN11-204ENST00000531326 TRIAP1O43715 76 aa10.32□□□□□ -0.76
PTPN11-204ENST00000531326 SLC25A20O43772 301 aa10.32□□□□□ -0.76
PTPN11-204ENST00000531326 IGLV5-48A0A075B6I7 105 aa10.31□□□□□ -0.76
PTPN11-204ENST00000531326 H0YGX0 51 aa10.31□□□□□ -0.76
PTPN11-204ENST00000531326 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
PTPN11-204ENST00000531326 FAM218AQ96MZ4 157 aa10.3□□□□□ -0.76
PTPN11-204ENST00000531326 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
PTPN11-204ENST00000531326 MUC17Q685J3 4493 aa10.28□□□□□ -0.76
PTPN11-204ENST00000531326 Q6ZQY7 126 aa10.28□□□□□ -0.76
PTPN11-204ENST00000531326 LINC00304Q8N9R0 145 aa10.28□□□□□ -0.76
PTPN11-204ENST00000531326 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms