RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 SLC25A20O43772 301 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 MALP21145 153 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 SYCNQ0VAF6 134 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
SSBP3-212ENST00000528930 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 TRBV7-7A0A0K0K1E9 115 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 H3BT86 120 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 TCL1BO95988 128 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 CFC1P0CG37 223 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
SSBP3-212ENST00000528930 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 LINC00242Q5T6M2 205 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 DPH3Q96FX2 82 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 C2orf48Q96LS8 159 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 AMELXQ99217 191 aa5.3□□□□□ -1.56
SSBP3-212ENST00000528930 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
SSBP3-212ENST00000528930 B5MCH6 92 aa5.29□□□□□ -1.56
SSBP3-212ENST00000528930 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
SSBP3-212ENST00000528930 PMVKQ15126 192 aa5.29□□□□□ -1.56
SSBP3-212ENST00000528930 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
SSBP3-212ENST00000528930 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
SSBP3-212ENST00000528930 A0A087WZ39 114 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 PPDPFQ9H3Y8 114 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 SS18L2Q9UHA2 77 aa5.28□□□□□ -1.56
SSBP3-212ENST00000528930 LOC107984640A0A0U1RRK4 108 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 A0A1B0GX51 115 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 LEPROTO15243 131 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 KIAA0087Q14695 138 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 PLEKHB2Q96CS7 222 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 PKIGQ9Y2B9 76 aa5.27□□□□□ -1.57
SSBP3-212ENST00000528930 A0A0J9YXV3 536 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 F8WDY8 70 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 COX6CP09669 75 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 HERV-K104P63124 156 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 C10orf25Q5T742 122 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 LINC01561Q8N1V8 128 aa5.26□□□□□ -1.57
SSBP3-212ENST00000528930 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
SSBP3-212ENST00000528930 TIMM17BO60830 172 aa5.25□□□□□ -1.57
SSBP3-212ENST00000528930 CXCL5P42830 114 aa5.25□□□□□ -1.57
SSBP3-212ENST00000528930 UNQ6190/PRO20217Q6UXQ8 127 aa5.25□□□□□ -1.57
SSBP3-212ENST00000528930 C6orf48Q9UBA6 75 aa5.25□□□□□ -1.57
SSBP3-212ENST00000528930 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 C9JAW5 83 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 J3QQQ9 107 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 NDUFA1O15239 70 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 C7orf33Q8WU49 177 aa5.24□□□□□ -1.57
SSBP3-212ENST00000528930 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
SSBP3-212ENST00000528930 HERVK_113P63121 156 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
SSBP3-212ENST00000528930 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 C2orf82Q6UX34 121 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 Q6ZRP5 223 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 CDKN2A-AS1Q9UH64 79 aa5.23□□□□□ -1.57
SSBP3-212ENST00000528930 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 A4D1N5 150 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 UQCRQO14949 82 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 PRR3P79522 188 aaKnown RBP5.22□□□□□ -1.57
SSBP3-212ENST00000528930 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
SSBP3-212ENST00000528930 LINC00643Q86TS7 51 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 SMIM20Q8N5G0 67 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 COPS9Q8WXC6 57 aa5.22□□□□□ -1.57
SSBP3-212ENST00000528930 LST1O00453 97 aa5.21□□□□□ -1.58
SSBP3-212ENST00000528930 ZNF22P17026 224 aaPredicted RBP5.21□□□□□ -1.58
SSBP3-212ENST00000528930 Q8IZM0 81 aa5.21□□□□□ -1.58
SSBP3-212ENST00000528930 IGLV5-45A0A087WSX0 123 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 TINCRA0A1B0GVN0 87 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 FAM168BA1KXE4 195 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 C5orf47Q569G3 176 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 PHF5AQ7RTV0 110 aaKnown RBP5.2□□□□□ -1.58
SSBP3-212ENST00000528930 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 C3orf22Q8N5N4 141 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 DAND5Q8N907 189 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
SSBP3-212ENST00000528930 SMIM1B2RUZ4 78 aa5.19□□□□□ -1.58
SSBP3-212ENST00000528930 NDUFC2-KCTD14E9PQ53 114 aa5.19□□□□□ -1.58
SSBP3-212ENST00000528930 CRYGAP11844 174 aa5.19□□□□□ -1.58
SSBP3-212ENST00000528930 C6orf226Q5I0X4 101 aa5.19□□□□□ -1.58
SSBP3-212ENST00000528930 MUSTN1Q8IVN3 82 aa5.19□□□□□ -1.58
SSBP3-212ENST00000528930 PRSS2P07478 247 aa5.18□□□□□ -1.58
SSBP3-212ENST00000528930 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
SSBP3-212ENST00000528930 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
SSBP3-212ENST00000528930 PSORS1C2Q9UIG4 136 aa5.18□□□□□ -1.58
SSBP3-212ENST00000528930 TEX49A0A1B0GTD5 131 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms