RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 MIFP14174 115 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
CTNND1-217ENST00000527599 C12orf74Q32Q52 190 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 SCGB1D4Q6XE38 83 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
CTNND1-217ENST00000527599 PRR15Q8IV56 129 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 Q8NAQ8 132 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 CDC42SE2Q9NRR3 84 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 NHP2Q9NX24 153 aaKnown RBP3.44□□□□□ -1.86
CTNND1-217ENST00000527599 TENM1Q9UKZ4 2725 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
CTNND1-217ENST00000527599 SMIM26A0A096LP01 95 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 TRBV6-8A0A0A6YYG3 113 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 TRAV8-3A0A0A6YYJ7 113 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 TRBV7-6A0A0J9YX20 115 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 IGLL5B9A064 214 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 ATOX1O00244 68 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 UBE2L6O14933 153 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 CDKN2A-AS1Q9UH64 79 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 SERP1Q9Y6X1 66 aa3.43□□□□□ -1.86
CTNND1-217ENST00000527599 VWFP04275 2813 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 DEFB4AO15263 64 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 IGHV3-30P01768 117 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 ACYP1P07311 99 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 IGHV3-30-5P0DP03 117 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 DAD1P61803 113 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 COX6A2Q02221 97 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 C3orf56Q8N813 242 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
CTNND1-217ENST00000527599 NIPBLQ6KC79 2804 aaeCLIP3.41□□□□□ -1.86
CTNND1-217ENST00000527599 SPART-AS1P0CW21 52 aa3.41□□□□□ -1.86
CTNND1-217ENST00000527599 SCGB1C2P0DMR2 95 aa3.41□□□□□ -1.86
CTNND1-217ENST00000527599 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
CTNND1-217ENST00000527599 NDUFA1O15239 70 aa3.4□□□□□ -1.87
CTNND1-217ENST00000527599 TIMM17BO60830 172 aa3.4□□□□□ -1.87
CTNND1-217ENST00000527599 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
CTNND1-217ENST00000527599 NPC2P61916 151 aa3.4□□□□□ -1.87
CTNND1-217ENST00000527599 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
CTNND1-217ENST00000527599 C15orf56Q8N910 161 aa3.4□□□□□ -1.87
CTNND1-217ENST00000527599 A0A096LPF7 62 aa3.39□□□□□ -1.87
CTNND1-217ENST00000527599 UBE2AP49459 152 aa3.39□□□□□ -1.87
CTNND1-217ENST00000527599 MIAQ16674 131 aa3.39□□□□□ -1.87
CTNND1-217ENST00000527599 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
CTNND1-217ENST00000527599 HUWE1Q7Z6Z7 4374 aaKnown RBP3.39□□□□□ -1.87
CTNND1-217ENST00000527599 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.38□□□□□ -1.87
CTNND1-217ENST00000527599 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 A0A0B4J2C4 111 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 H3BT86 120 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 HTN3P15516 51 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 DEFB121Q5J5C9 76 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 ZNF625Q96I27 306 aaPredicted RBP3.38□□□□□ -1.87
CTNND1-217ENST00000527599 C11orf68Q9H3H3 251 aaKnown RBP3.38□□□□□ -1.87
CTNND1-217ENST00000527599 ICOSQ9Y6W8 199 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 ANK2Q01484 3957 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 STAB1Q9NY15 2570 aa3.38□□□□□ -1.87
CTNND1-217ENST00000527599 TRAV8-4A0A0B4J246 113 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 SS18Q15532 418 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 LELP1Q5T871 98 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 SDIM1Q6ZPB5 146 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
CTNND1-217ENST00000527599 H3BNG1 76 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 BCE1O60756 84 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 TCL1BO95988 128 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 CIRBPQ14011 172 aaKnown RBP3.36□□□□□ -1.87
CTNND1-217ENST00000527599 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 DAND5Q8N907 189 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 UPK3BQ9BT76 320 aa3.36□□□□□ -1.87
CTNND1-217ENST00000527599 NBEAL2Q6ZNJ1 2754 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 DNAH9Q9NYC9 4486 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
CTNND1-217ENST00000527599 XCL1P47992 114 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 LYPD5Q6UWN5 251 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 LINC00269Q8N2A0 174 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 TM2D3Q9BRN9 247 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 TOMM7Q9P0U1 55 aa3.35□□□□□ -1.87
CTNND1-217ENST00000527599 K7EIL1 84 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 NDUFS5O43920 106 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 Q8IZM0 81 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
CTNND1-217ENST00000527599 FBN1P35555 2871 aaKnown RBP3.33□□□□□ -1.88
CTNND1-217ENST00000527599 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
CTNND1-217ENST00000527599 IBA57-AS1B1ANH7 110 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 287.9 ms