RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
CTNND1-211ENST00000525821 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 K7EMI3 77 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 UBE2AP49459 152 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 MRPS36P82909 103 aaKnown RBP3.3□□□□□ -1.88
CTNND1-211ENST00000525821 Q6ZN92 141 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 FA2HQ7L5A8 372 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
CTNND1-211ENST00000525821 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 TEX43Q6ZNM6 134 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 DAND5Q8N907 189 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 MAP1LC3CQ9BXW4 147 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 SMCO4Q9NRQ5 59 aa3.29□□□□□ -1.88
CTNND1-211ENST00000525821 IGHV3OR16-9A0A0B4J2B5 98 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 IGIPA6NJ69 53 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 LINC00614P0C842 121 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 RAB5BP61020 215 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
CTNND1-211ENST00000525821 TOMM6Q96B49 74 aa3.28□□□□□ -1.88
CTNND1-211ENST00000525821 PACRGQ96M98 296 aaPredicted RBP3.28□□□□□ -1.88
CTNND1-211ENST00000525821 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 HSBP1O75506 76 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 PRLHP81277 87 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 CBLN2Q8IUK8 224 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 AMELXQ99217 191 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
CTNND1-211ENST00000525821 LINC01546A6NGU7 62 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 SCO1O75880 301 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 NDUFA6P56556 154 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 SEC11AP67812 179 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 SPAG11AQ6PDA7 123 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 CBY1Q9Y3M2 126 aa3.26□□□□□ -1.89
CTNND1-211ENST00000525821 HERVK_113P63121 156 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 PMVKQ15126 192 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 BAGE3Q86Y29 109 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 C18orf32Q8TCD1 76 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 YPEL4Q96NS1 127 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 CST9LQ9H4G1 147 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
CTNND1-211ENST00000525821 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 TINCRA0A1B0GVN0 87 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 HBDP02042 147 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 TRGC2P03986 189 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 CKS1BP61024 79 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 PMCHL1Q16048 86 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
CTNND1-211ENST00000525821 PLEKHB2Q96CS7 222 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 CDKN2A-AS1Q9UH64 79 aa3.24□□□□□ -1.89
CTNND1-211ENST00000525821 COLCA2A8K830 154 aa3.23□□□□□ -1.89
CTNND1-211ENST00000525821 TMEM238C9JI98 176 aa3.23□□□□□ -1.89
CTNND1-211ENST00000525821 FAM19A1Q7Z5A9 133 aa3.23□□□□□ -1.89
CTNND1-211ENST00000525821 A0A096LNJ9 63 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 A0A1B0GWB2 263 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 H3BRM9 83 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 PDZD11Q5EBL8 140 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 Q8IZM0 81 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 NDUFA12Q9UI09 145 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 V9GYY9 64 aa3.22□□□□□ -1.89
CTNND1-211ENST00000525821 SPINK8P0C7L1 97 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 FAM19A2Q8N3H0 131 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 COX7B2Q8TF08 81 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 IFI27L1Q96BM0 104 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 SPRR4Q96PI1 79 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 HIGD2AQ9BW72 106 aa3.21□□□□□ -1.9
CTNND1-211ENST00000525821 TRAV12-1A0A0B4J245 112 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 F8VRH5 84 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 SPINK1P00995 79 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 IGLC3P0DOY3 106 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 FABP4P15090 132 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 CXCL5P42830 114 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 HERVK_113P61574 105 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 TMEM170BQ5T4T1 132 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 TMEM126AQ9H061 195 aa3.2□□□□□ -1.9
CTNND1-211ENST00000525821 M0R378 163 aa3.19□□□□□ -1.9
CTNND1-211ENST00000525821 ZNF22P17026 224 aaPredicted RBP3.19□□□□□ -1.9
CTNND1-211ENST00000525821 NEBP20929 6669 aa3.19□□□□□ -1.9
CTNND1-211ENST00000525821 C11orf86A6NJI1 115 aa3.18□□□□□ -1.9
CTNND1-211ENST00000525821 Q6Q795 121 aa3.18□□□□□ -1.9
CTNND1-211ENST00000525821 BOD1L2Q8IYS8 172 aa3.18□□□□□ -1.9
CTNND1-211ENST00000525821 HSPB8Q9UJY1 196 aa3.18□□□□□ -1.9
CTNND1-211ENST00000525821 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
CTNND1-211ENST00000525821 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
CTNND1-211ENST00000525821 SLC25A20O43772 301 aa3.17□□□□□ -1.9
CTNND1-211ENST00000525821 HIST1H2BKO60814 126 aa3.17□□□□□ -1.9
CTNND1-211ENST00000525821 HIST1H2BJP06899 126 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms