RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FBN1P35555 2871 aaKnown RBP1.55□□□□□ -2.16
SKP1-212ENST00000523966 ANK3Q12955 4377 aaKnown RBP1.55□□□□□ -2.16
SKP1-212ENST00000523966 LINC00587B1AMM8 73 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 LINC00694P0DN24 101 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 FGF6P10767 208 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 TMEM258P61165 79 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 RPL39P62891 51 aaKnown RBP1.55□□□□□ -2.16
SKP1-212ENST00000523966 BATFQ16520 125 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 DEFB121Q5J5C9 76 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 COL5A1-AS1Q5SY13 56 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 TMEM170BQ5T4T1 132 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 SFTA2Q6UW10 78 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 COPS9Q8WXC6 57 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 HIGD1BQ9P298 99 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 UBE2D4Q9Y2X8 147 aa1.55□□□□□ -2.16
SKP1-212ENST00000523966 PKD1L1Q8TDX9 2849 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 CUBNO60494 3623 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.54□□□□□ -2.16
SKP1-212ENST00000523966 TRAV10A0A0B4J240 114 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 TRAV13-1A0A0B4J241 112 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 IGHV1-58A0A0C4DH39 117 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 A0A0G2JQZ4 141 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 MYMXA0A1B0GTQ4 84 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 IGKV2-29A2NJV5 120 aaPredicted RBP1.54□□□□□ -2.16
SKP1-212ENST00000523966 TMEM262E9PQX1 116 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 K7EIL1 84 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 LEPROTO15243 131 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 DEFB4AO15263 64 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 HTN3P15516 51 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 UBE2D1P51668 147 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 HSD52Q0P140 79 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 CIRBPQ14011 172 aaKnown RBP1.54□□□□□ -2.16
SKP1-212ENST00000523966 C12orf74Q32Q52 190 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 PCOTHQ58A44 107 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 LELP1Q5T871 98 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 SBSPONQ8IVN8 264 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 C10orf126Q8N4M7 172 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 C15orf53Q8NAA6 179 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 CDC42SE2Q9NRR3 84 aa1.54□□□□□ -2.16
SKP1-212ENST00000523966 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 A0A096LPF7 62 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 A0A0J9YY99 117 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 A0A1B0GW54 56 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 ZNF815PA8K554 130 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 K7EP13 123 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 TIMM17BO60830 172 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 APOMO95445 188 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
SKP1-212ENST00000523966 CCL18P55774 89 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 C1orf195Q5TG92 126 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 Q6ZUT4 128 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 SMCR5Q8TEV8 140 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 DEFB104AQ8WTQ1 72 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 TP73-AS1Q9UF72 201 aa1.53□□□□□ -2.16
SKP1-212ENST00000523966 KLK5Q9Y337 293 aaPredicted RBP1.53□□□□□ -2.16
SKP1-212ENST00000523966 IGKV2D-26A0A0A0MRZ7 120 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.52□□□□□ -2.17
SKP1-212ENST00000523966 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 COX7A2LO14548 114 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 NDUFA1O15239 70 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 CRPP02741 224 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 IFITM1P13164 125 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 TCTAP57738 103 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 MIAQ16674 131 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 BVES-AS1Q5T3Y7 98 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 LYPD5Q6UWN5 251 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 SNHG12Q9BXW3 62 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 CDKN2A-AS1Q9UH64 79 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 NDUFA12Q9UI09 145 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 TENM3Q9P273 2699 aa1.52□□□□□ -2.17
SKP1-212ENST00000523966 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 NUPR2A6NF83 97 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 SPINK8P0C7L1 97 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 SMIM13P0DJ93 91 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 CKS1BP61024 79 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 COX6A2Q02221 97 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 COX17Q14061 63 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 MEIG1Q5JSS6 88 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 LYRM7Q5U5X0 104 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 GTF2H5Q6ZYL4 71 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 Q8IZM0 81 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 TTTY13Q9BZ97 58 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 PRO2289Q9P1D8 64 aa1.51□□□□□ -2.17
SKP1-212ENST00000523966 IGHV3-64A0A075B6Q5 118 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 IGHV3-30P01768 117 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 COX6CP09669 75 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 IGHV3-30-5P0DP03 117 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 FABP2P12104 132 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 LINC00158P58513 81 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 ESRGQ1W209 222 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 C5orf38Q86SI9 138 aa1.5□□□□□ -2.17
SKP1-212ENST00000523966 RAB37Q96AX2 223 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms