RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CTAG1AP78358 180 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 Q6ZRP5 223 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 Q6ZVH6 145 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-210ENST00000522843 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-210ENST00000522843 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
SDCBP-210ENST00000522843 IGLV10-54A0A075B6I4 117 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-210ENST00000522843 M0R143 59 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 NDUFA1O15239 70 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 LGALS3P17931 250 aaKnown RBP3.95□□□□□ -1.78
SDCBP-210ENST00000522843 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
SDCBP-210ENST00000522843 ZNF625Q96I27 306 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-210ENST00000522843 ZNF815PA8K554 130 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 COX7A2LO14548 114 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 HSD52Q0P140 79 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 Q8IZM0 81 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 LITAFQ99732 161 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 TTTY13Q9BZ97 58 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 NDUFA12Q9UI09 145 aa3.94□□□□□ -1.78
SDCBP-210ENST00000522843 LOC107984156A0A0G2JMH3 177 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 APOMO95445 188 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 CXCL5P42830 114 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 XCL1P47992 114 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 BVES-AS1Q5T3Y7 98 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 ARL17AQ8IVW1 177 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 COX7B2Q8TF08 81 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 C2orf48Q96LS8 159 aa3.93□□□□□ -1.78
SDCBP-210ENST00000522843 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-210ENST00000522843 A0A1B0GWB2 263 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 IFITM1P13164 125 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 COX17Q14061 63 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 CEND1Q8N111 149 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 SPANXCQ9NY87 97 aa3.92□□□□□ -1.78
SDCBP-210ENST00000522843 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 TMEM238C9JI98 176 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 C6orf226Q5I0X4 101 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 SCGB1D4Q6XE38 83 aa3.91□□□□□ -1.78
SDCBP-210ENST00000522843 HINT1P49773 126 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-210ENST00000522843 COL5A1-AS1Q5SY13 56 aa3.9□□□□□ -1.79
SDCBP-210ENST00000522843 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.79
SDCBP-210ENST00000522843 COPS9Q8WXC6 57 aa3.9□□□□□ -1.79
SDCBP-210ENST00000522843 HIST1H4GQ99525 98 aa3.9□□□□□ -1.79
SDCBP-210ENST00000522843 IGLV1-50A0A075B6I6 118 aa3.89□□□□□ -1.79
SDCBP-210ENST00000522843 A6NDN8 102 aa3.89□□□□□ -1.79
SDCBP-210ENST00000522843 H0Y9J4 135 aa3.89□□□□□ -1.79
SDCBP-210ENST00000522843 MEIG1Q5JSS6 88 aa3.89□□□□□ -1.79
SDCBP-210ENST00000522843 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
SDCBP-210ENST00000522843 TRBV30A0A0K0K1B3 111 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 TSPAN13O95857 204 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 SMIM13P0DJ93 91 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 FXYD2P54710 66 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 CKS1BP61024 79 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 C1orf137Q5JT78 98 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 MUSTN1Q8IVN3 82 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 LINC00308Q8TCZ7 52 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 USH2AO75445 5202 aa3.88□□□□□ -1.79
SDCBP-210ENST00000522843 A0A0B4J2C4 111 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 TAX1BP3O14907 124 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 TLX1NBP0CAT3 122 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 SPAG11BQ08648 103 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
SDCBP-210ENST00000522843 DIRC1Q969H9 104 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 TOMM7Q9P0U1 55 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 ERG28Q9UKR5 140 aa3.87□□□□□ -1.79
SDCBP-210ENST00000522843 NDUFC2O95298 119 aa3.86□□□□□ -1.79
SDCBP-210ENST00000522843 C2orf82Q6UX34 121 aa3.86□□□□□ -1.79
SDCBP-210ENST00000522843 UNQ6190/PRO20217Q6UXQ8 127 aa3.86□□□□□ -1.79
SDCBP-210ENST00000522843 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
SDCBP-210ENST00000522843 LINC00158P58513 81 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 SOSTDC1Q6X4U4 206 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 MIR7-3HGQ8N6C7 128 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 C6orf48Q9UBA6 75 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 PRO1854Q9UHT4 67 aa3.85□□□□□ -1.79
SDCBP-210ENST00000522843 SYCNQ0VAF6 134 aa3.84□□□□□ -1.79
SDCBP-210ENST00000522843 BATFQ16520 125 aa3.84□□□□□ -1.79
SDCBP-210ENST00000522843 C9orf116Q5BN46 136 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-210ENST00000522843 FAM218AQ96MZ4 157 aa3.84□□□□□ -1.79
SDCBP-210ENST00000522843 IGLV7-46A0A075B6I9 117 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 TRBV10-2A0A0K0K1G8 114 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 NDUFC2-KCTD14E9PQ53 114 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms