RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	SRCAP	Q6ZRS2	3230 aa		-1.13	□□□□□ -2.59
MSR1-211	ENST00000520846	COL6A5	A8TX70	2615 aa		-1.13	□□□□□ -2.59
MSR1-211	ENST00000520846	ATOX1	O00244	68 aa		-1.14	□□□□□ -2.59
MSR1-211	ENST00000520846	DEFA5	Q01523	94 aa		-1.14	□□□□□ -2.59
MSR1-211	ENST00000520846	PDE4DIP	Q5VU43	2346 aa		-1.14	□□□□□ -2.59
MSR1-211	ENST00000520846	AKAP9	Q99996	3911 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	RGPD2	P0DJD1	1756 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	HMGN3	Q15651	99 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	SERP2	Q8N6R1	65 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	PSENEN	Q9NZ42	101 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	DNAH9	Q9NYC9	4486 aa		-1.15	□□□□□ -2.59
MSR1-211	ENST00000520846	ANKRD36B	Q8N2N9	1353 aa		-1.16	□□□□□ -2.59
MSR1-211	ENST00000520846	TEX15	Q9BXT5	2789 aa		-1.16	□□□□□ -2.6
MSR1-211	ENST00000520846	NRXN1	Q9ULB1	1477 aa		-1.17	□□□□□ -2.6
MSR1-211	ENST00000520846	EYS	Q5T1H1	3165 aa		-1.17	□□□□□ -2.6
MSR1-211	ENST00000520846	TMEM218	A2RU14	115 aa		-1.17	□□□□□ -2.6
MSR1-211	ENST00000520846	MT-ATP8	P03928	68 aa		-1.17	□□□□□ -2.6
MSR1-211	ENST00000520846	ALKAL2	Q6UX46	152 aa		-1.17	□□□□□ -2.6
MSR1-211	ENST00000520846	SACS	Q9NZJ4	4579 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	MGAM2	Q2M2H8	2515 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846		A0A0C4DFX4	3053 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	DNAH11	Q96DT5	4516 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846		D6R8Y8	96 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	ETDB	Q3ZM63	59 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	MUSTN1	Q8IVN3	82 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	SPRR2F	Q96RM1	72 aa		-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	CIC	Q96RK0	1608 aa	Predicted RBP	-1.18	□□□□□ -2.6
MSR1-211	ENST00000520846	ITPR1	Q14643	2758 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	CMYA5	Q8N3K9	4069 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	IGLC2	P0DOY2	106 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	IGLC3	P0DOY3	106 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	ZNF720	Q7Z2F6	126 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	CRYBG1	Q9Y4K1	1723 aa		-1.19	□□□□□ -2.6
MSR1-211	ENST00000520846	RIF1	Q5UIP0	2472 aa	Known RBP	-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	VPS13B	Q7Z7G8	4022 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	LEPROTL1	O95214	131 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	S100A10	P60903	97 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	NMS	Q5H8A3	153 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	FYCO1	Q9BQS8	1478 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	DNAH1	Q9P2D7	4330 aa		-1.2	□□□□□ -2.6
MSR1-211	ENST00000520846	COL5A1-AS1	Q5SY13	56 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	UBR3	Q6ZT12	1888 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	TRANK1	O15050	2925 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	MTOR	P42345	2549 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	LRRK2	Q5S007	2527 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	QSER1	Q2KHR3	1735 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	PKD1L3	Q7Z443	1732 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	RELN	P78509	3460 aa		-1.21	□□□□□ -2.6
MSR1-211	ENST00000520846	KALRN	O60229	2985 aa		-1.22	□□□□□ -2.6
MSR1-211	ENST00000520846	UQCRHL	A0A096LP55	91 aa		-1.22	□□□□□ -2.6
MSR1-211	ENST00000520846		F8WEM9	126 aa		-1.22	□□□□□ -2.6
MSR1-211	ENST00000520846	LINC00032	P0C843	101 aa		-1.22	□□□□□ -2.6
MSR1-211	ENST00000520846	S100P	P25815	95 aa		-1.22	□□□□□ -2.6
MSR1-211	ENST00000520846	NBEA	Q8NFP9	2946 aa		-1.22	□□□□□ -2.61
MSR1-211	ENST00000520846	CLTC	Q00610	1675 aa	Known RBP	-1.23	□□□□□ -2.61
MSR1-211	ENST00000520846	GCN1	Q92616	2671 aa	Known RBP	-1.23	□□□□□ -2.61
MSR1-211	ENST00000520846	PREX1	Q8TCU6	1659 aa		-1.23	□□□□□ -2.61
MSR1-211	ENST00000520846	LYST	Q99698	3801 aa		-1.23	□□□□□ -2.61
MSR1-211	ENST00000520846	TRO	Q12816	1431 aa	Predicted RBP	-1.23	□□□□□ -2.61
MSR1-211	ENST00000520846	SMG1	Q96Q15	3661 aa	Known RBP	-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	MYH4	Q9Y623	1939 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	KRTAP20-1	Q3LI63	56 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	TCEAL7	Q9BRU2	100 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	ITPR2	Q14571	2701 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	MAGI2	Q86UL8	1455 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	TEX14	Q8IWB6	1497 aa		-1.24	□□□□□ -2.61
MSR1-211	ENST00000520846	FAU	P35544	74 aa	Known RBP	-1.25	□□□□□ -2.61
MSR1-211	ENST00000520846	C14orf144	Q96I85	54 aa		-1.25	□□□□□ -2.61
MSR1-211	ENST00000520846	UBE2D4	Q9Y2X8	147 aa		-1.25	□□□□□ -2.61
MSR1-211	ENST00000520846	CHD7	Q9P2D1	2997 aa		-1.26	□□□□□ -2.61
MSR1-211	ENST00000520846	COX7B	P24311	80 aa		-1.26	□□□□□ -2.61
MSR1-211	ENST00000520846	COX6B2	Q6YFQ2	88 aa		-1.26	□□□□□ -2.61
MSR1-211	ENST00000520846	CCDC168	Q8NDH2	2452 aa		-1.26	□□□□□ -2.61
MSR1-211	ENST00000520846	TRIO	O75962	3097 aa		-1.26	□□□□□ -2.61
MSR1-211	ENST00000520846	DNAH5	Q8TE73	4624 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	ACACA	Q13085	2346 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	MT1A	P04731	61 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	DPY30	Q9C005	99 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	EPRS	P07814	1512 aa	Known RBP	-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	RGPD8	O14715	1765 aa	Predicted RBP	-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	RGPD5	Q99666	1765 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	DMXL1	Q9Y485	3027 aa		-1.27	□□□□□ -2.61
MSR1-211	ENST00000520846	RPL38	P63173	70 aa	Known RBP	-1.28	□□□□□ -2.61
MSR1-211	ENST00000520846	UTP20	O75691	2785 aa	Known RBP	-1.29	□□□□□ -2.62
MSR1-211	ENST00000520846	LRRC9	Q6ZRR7	1453 aa		-1.29	□□□□□ -2.62
MSR1-211	ENST00000520846	DNAH7	Q8WXX0	4024 aa		-1.29	□□□□□ -2.62
MSR1-211	ENST00000520846	DNAH17	Q9UFH2	4485 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	FANCA	O15360	1455 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	CNTLN	Q9NXG0	1405 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	PKD1L2	Q7Z442	2459 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846		H3BNG1	76 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	MT1H	P80294	61 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	KRTAP19-6	Q3LI70	58 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	CEP295	Q9C0D2	2601 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	ALK	Q9UM73	1620 aa		-1.3	□□□□□ -2.62
MSR1-211	ENST00000520846	C4A	P0C0L4	1744 aa		-1.31	□□□□□ -2.62
MSR1-211	ENST00000520846	C4B	P0C0L5	1744 aa		-1.31	□□□□□ -2.62
MSR1-211	ENST00000520846		H0YAA0	97 aa		-1.31	□□□□□ -2.62
MSR1-211	ENST00000520846	MT1HL1	P0DM35	61 aa		-1.31	□□□□□ -2.62
MSR1-211	ENST00000520846	ACBD7	Q8N6N7	88 aa		-1.31	□□□□□ -2.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms