RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
CTNNA1-213ENST00000519113 VAMP3Q15836 100 aa11.51□□□□□ -0.57
CTNNA1-213ENST00000519113 NAA38Q9BRA0 125 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-213ENST00000519113 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
CTNNA1-213ENST00000519113 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-213ENST00000519113 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-213ENST00000519113 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
CTNNA1-213ENST00000519113 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 A0A1W2PPM0 123 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 TSPAN13O95857 204 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 FABP2P12104 132 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 PRR4Q16378 134 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
CTNNA1-213ENST00000519113 H0Y9J4 135 aa11.47□□□□□ -0.57
CTNNA1-213ENST00000519113 Q1RN00 199 aa11.47□□□□□ -0.57
CTNNA1-213ENST00000519113 H7C2G1 150 aa11.46□□□□□ -0.57
CTNNA1-213ENST00000519113 RNF151Q2KHN1 245 aa11.46□□□□□ -0.57
CTNNA1-213ENST00000519113 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
CTNNA1-213ENST00000519113 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-213ENST00000519113 PSMB2P49721 201 aa11.44□□□□□ -0.58
CTNNA1-213ENST00000519113 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
CTNNA1-213ENST00000519113 NDUFC2O95298 119 aa11.43□□□□□ -0.58
CTNNA1-213ENST00000519113 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CTNNA1-213ENST00000519113 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
CTNNA1-213ENST00000519113 GTF2H5Q6ZYL4 71 aa11.42□□□□□ -0.58
CTNNA1-213ENST00000519113 SPCS1Q9Y6A9 102 aa11.42□□□□□ -0.58
CTNNA1-213ENST00000519113 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
CTNNA1-213ENST00000519113 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.58
CTNNA1-213ENST00000519113 K7EP34 96 aa11.4□□□□□ -0.58
CTNNA1-213ENST00000519113 IGKV2D-28P01615 120 aa11.4□□□□□ -0.58
CTNNA1-213ENST00000519113 UBE2V1Q13404 147 aa11.4□□□□□ -0.58
CTNNA1-213ENST00000519113 KRTAP1-4P0C5Y4 121 aa11.39□□□□□ -0.59
CTNNA1-213ENST00000519113 TLX1NBP0CAT3 122 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 LINC00337Q8N6G1 96 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
CTNNA1-213ENST00000519113 COX6CP09669 75 aa11.37□□□□□ -0.59
CTNNA1-213ENST00000519113 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
CTNNA1-213ENST00000519113 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
CTNNA1-213ENST00000519113 TRIAP1O43715 76 aa11.35□□□□□ -0.59
CTNNA1-213ENST00000519113 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-213ENST00000519113 TRBV20-1A0A075B6N2 111 aa11.34□□□□□ -0.59
CTNNA1-213ENST00000519113 NCR3O14931 201 aa11.34□□□□□ -0.59
CTNNA1-213ENST00000519113 UBE2BP63146 152 aa11.33□□□□□ -0.6
CTNNA1-213ENST00000519113 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
CTNNA1-213ENST00000519113 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
CTNNA1-213ENST00000519113 TMEM126AQ9H061 195 aa11.32□□□□□ -0.6
CTNNA1-213ENST00000519113 KRTAP9-6A0A140TA67 174 aa11.31□□□□□ -0.6
CTNNA1-213ENST00000519113 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-213ENST00000519113 LCE2AQ5TA79 106 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-213ENST00000519113 Q8NDZ9 215 aa11.31□□□□□ -0.6
CTNNA1-213ENST00000519113 M0QXV9 152 aa11.3□□□□□ -0.6
CTNNA1-213ENST00000519113 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
CTNNA1-213ENST00000519113 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
CTNNA1-213ENST00000519113 TCL1BO95988 128 aa11.29□□□□□ -0.6
CTNNA1-213ENST00000519113 VPREB1P12018 145 aa11.29□□□□□ -0.6
CTNNA1-213ENST00000519113 C9orf129Q5T035 196 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-213ENST00000519113 ATXN8Q156A1 80 aa11.28□□□□□ -0.6
CTNNA1-213ENST00000519113 H3BMG7 143 aa11.27□□□□□ -0.61
CTNNA1-213ENST00000519113 M0R378 163 aa11.27□□□□□ -0.61
CTNNA1-213ENST00000519113 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.61
CTNNA1-213ENST00000519113 NKAPP1Q8N9T2 125 aa11.25□□□□□ -0.61
CTNNA1-213ENST00000519113 H0YGX0 51 aa11.24□□□□□ -0.61
CTNNA1-213ENST00000519113 ZNF861PO60384 105 aa11.24□□□□□ -0.61
CTNNA1-213ENST00000519113 IGLV6-57P01721 117 aa11.24□□□□□ -0.61
CTNNA1-213ENST00000519113 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
CTNNA1-213ENST00000519113 CLEC2BQ92478 149 aa11.23□□□□□ -0.61
CTNNA1-213ENST00000519113 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.61
CTNNA1-213ENST00000519113 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.61
CTNNA1-213ENST00000519113 F8W1H4 67 aa11.21□□□□□ -0.61
CTNNA1-213ENST00000519113 LST1O00453 97 aa11.2□□□□□ -0.62
CTNNA1-213ENST00000519113 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
CTNNA1-213ENST00000519113 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
CTNNA1-213ENST00000519113 C9JAW5 83 aa11.16□□□□□ -0.62
CTNNA1-213ENST00000519113 TRACP01848 142 aa11.16□□□□□ -0.62
CTNNA1-213ENST00000519113 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
CTNNA1-213ENST00000519113 PRO0461Q9UI25 63 aa11.16□□□□□ -0.62
CTNNA1-213ENST00000519113 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
CTNNA1-213ENST00000519113 CRYGAP11844 174 aa11.15□□□□□ -0.62
CTNNA1-213ENST00000519113 MTURNQ8N3F0 131 aa11.15□□□□□ -0.62
CTNNA1-213ENST00000519113 A0A087X002 238 aa11.14□□□□□ -0.63
CTNNA1-213ENST00000519113 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-213ENST00000519113 SNCGO76070 127 aa11.14□□□□□ -0.63
CTNNA1-213ENST00000519113 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
CTNNA1-213ENST00000519113 SLC25A20O43772 301 aa11.13□□□□□ -0.63
CTNNA1-213ENST00000519113 MRPL55Q7Z7F7 128 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-213ENST00000519113 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
CTNNA1-213ENST00000519113 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
CTNNA1-213ENST00000519113 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
CTNNA1-213ENST00000519113 A0A1B0GX51 115 aa11.11□□□□□ -0.63
CTNNA1-213ENST00000519113 DNAL4O96015 105 aa11.11□□□□□ -0.63
CTNNA1-213ENST00000519113 COX7BP24311 80 aa11.1□□□□□ -0.63
CTNNA1-213ENST00000519113 CDIP1Q9H305 208 aa11.1□□□□□ -0.63
CTNNA1-213ENST00000519113 RPL37AP8A6NKH3 93 aa11.09□□□□□ -0.63
CTNNA1-213ENST00000519113 PRYO14603 147 aa11.09□□□□□ -0.63
CTNNA1-213ENST00000519113 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-213ENST00000519113 ANKRD29Q8N6D5 301 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms