RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 UBR3Q6ZT12 1888 aa-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 NDUFB1O75438 58 aa-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 RPL38P63173 70 aaKnown RBP-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 RGPD1P0DJD0 1748 aa-0.22□□□□□ -2.44
RNU6-840P-201ENST00000517275 RB1CC1Q8TDY2 1594 aa-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 RGPD8O14715 1765 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 RGPD2P0DJD1 1756 aa-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 RGPD5Q99666 1765 aa-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 WFDC13Q8IUB5 93 aa-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-840P-201ENST00000517275 TMEM131LA2VDJ0 1609 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 KIF14Q15058 1648 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 USP32Q8NFA0 1604 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 MAP3K4Q9Y6R4 1608 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 ACANP16112 2415 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 DEFB121Q5J5C9 76 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 HEPN1Q6WQI6 88 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 TRANK1O15050 2925 aa-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 COL14A1Q05707 1796 aaKnown RBP-0.24□□□□□ -2.45
RNU6-840P-201ENST00000517275 BCORQ6W2J9 1755 aa-0.25□□□□□ -2.45
RNU6-840P-201ENST00000517275 CNOT1A5YKK6 2376 aaKnown RBP-0.25□□□□□ -2.45
RNU6-840P-201ENST00000517275 MAP1AP78559 2803 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 PCNX1Q96RV3 2341 aa-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 PREX1Q8TCU6 1659 aa-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 URB2Q14146 1524 aaKnown RBP-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 DEFB135Q30KP9 77 aa-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 ST20Q9HBF5 79 aa-0.26□□□□□ -2.45
RNU6-840P-201ENST00000517275 PKHD1P08F94 4074 aa-0.27□□□□□ -2.45
RNU6-840P-201ENST00000517275 LCE6AA0A183 80 aa-0.28□□□□□ -2.45
RNU6-840P-201ENST00000517275 WFDC9Q8NEX5 89 aa-0.28□□□□□ -2.45
RNU6-840P-201ENST00000517275 S100A13Q99584 98 aa-0.28□□□□□ -2.45
RNU6-840P-201ENST00000517275 KNL1Q8NG31 2342 aa-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 NCOA2Q15596 1464 aa-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 PKD1P98161 4303 aa-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 NDUFA3O95167 84 aa-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 HMGA1P17096 107 aaKnown RBP-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 ADIRFQ15847 76 aa-0.29□□□□□ -2.46
RNU6-840P-201ENST00000517275 CICQ96RK0 1608 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 PTPN23Q9H3S7 1636 aa-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 KRTAP6-1Q3LI64 71 aa-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 MAGI3Q5TCQ9 1506 aa-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 CCDC88BA6NC98 1476 aa-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 SUPT6HQ7KZ85 1726 aaKnown RBP-0.3□□□□□ -2.46
RNU6-840P-201ENST00000517275 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
RNU6-840P-201ENST00000517275 C3orf79P0CE67 100 aa-0.31□□□□□ -2.46
RNU6-840P-201ENST00000517275 ATP5EP2Q5VTU8 51 aa-0.31□□□□□ -2.46
RNU6-840P-201ENST00000517275 PDZD2O15018 2839 aa-0.31□□□□□ -2.46
RNU6-840P-201ENST00000517275 UMAD1C9J7I0 102 aa-0.32□□□□□ -2.46
RNU6-840P-201ENST00000517275 IFI6P09912 130 aa-0.32□□□□□ -2.46
RNU6-840P-201ENST00000517275 SPRR2AP35326 72 aa-0.32□□□□□ -2.46
RNU6-840P-201ENST00000517275 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
RNU6-840P-201ENST00000517275 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
RNU6-840P-201ENST00000517275 POLR1AO95602 1720 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 ERVK-7P63135 1459 aa-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 CCDC18Q5T9S5 1454 aa-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 FLGP20930 4061 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 TIAM2Q8IVF5 1701 aa-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 ZNF831Q5JPB2 1677 aa-0.33□□□□□ -2.46
RNU6-840P-201ENST00000517275 LTN1O94822 1766 aa-0.34□□□□□ -2.46
RNU6-840P-201ENST00000517275 IFI27P40305 119 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-840P-201ENST00000517275 NWD1Q149M9 1564 aa-0.34□□□□□ -2.46
RNU6-840P-201ENST00000517275 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.46
RNU6-840P-201ENST00000517275 STAB2Q8WWQ8 2551 aa-0.35□□□□□ -2.46
RNU6-840P-201ENST00000517275 DIP2BQ9P265 1576 aa-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 BVES-AS1Q5T3Y7 98 aa-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 WIZO95785 1651 aa-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 ABCC1P33527 1531 aa-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 DOT1LQ8TEK3 1739 aa-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 PRRC2CQ9Y520 2896 aaKnown RBP-0.35□□□□□ -2.47
RNU6-840P-201ENST00000517275 H3BUT2 72 aa-0.36□□□□□ -2.47
RNU6-840P-201ENST00000517275 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
RNU6-840P-201ENST00000517275 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
RNU6-840P-201ENST00000517275 DSTQ03001 7570 aaKnown RBP-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 PDE4DIPQ5VU43 2346 aa-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 DCAF1Q9Y4B6 1507 aa-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 PIK3C2BO00750 1634 aa-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 KRTAP6-2Q3LI66 62 aa-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 PRO3102Q9H379 93 aa-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.37□□□□□ -2.47
RNU6-840P-201ENST00000517275 KDM5DQ9BY66 1539 aa-0.38□□□□□ -2.47
RNU6-840P-201ENST00000517275 TGP01266 2768 aa-0.38□□□□□ -2.47
RNU6-840P-201ENST00000517275 TNRC18O15417 2968 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-840P-201ENST00000517275 HECTD1Q9ULT8 2610 aa-0.38□□□□□ -2.47
RNU6-840P-201ENST00000517275 LYSTQ99698 3801 aa-0.39□□□□□ -2.47
RNU6-840P-201ENST00000517275 C18orf32Q8TCD1 76 aa-0.39□□□□□ -2.47
RNU6-840P-201ENST00000517275 DSPP15924 2871 aaKnown RBP-0.39□□□□□ -2.47
RNU6-840P-201ENST00000517275 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 CD163L1Q9NR16 1453 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 LYNX1G3V0Z9 82 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 SMIM13P0DJ93 91 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 LINC00158P58513 81 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 NREPQ16612 68 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 NESP48681 1621 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 SETD2Q9BYW2 2564 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 PLXNC1O60486 1568 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 CFAP74Q9C0B2 1584 aa-0.4□□□□□ -2.47
RNU6-840P-201ENST00000517275 SPRR2EP22531 72 aa-0.41□□□□□ -2.48
RNU6-840P-201ENST00000517275 ANKRD50Q9ULJ7 1429 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms