RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 DIP2BQ9P265 1576 aa0.15□□□□□ -2.39
ATR-209ENST00000515810 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
ATR-209ENST00000515810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.14□□□□□ -2.39
ATR-209ENST00000515810 POLR1AO95602 1720 aaPredicted RBP0.14□□□□□ -2.39
ATR-209ENST00000515810 TIAM2Q8IVF5 1701 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 KLK9Q2XQG4 91 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 H1FX-AS1Q4G0G2 97 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 WFDC9Q8NEX5 89 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 RGPD8O14715 1765 aaPredicted RBP0.14□□□□□ -2.39
ATR-209ENST00000515810 RGPD5Q99666 1765 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 MYCBP2O75592 4640 aa0.14□□□□□ -2.39
ATR-209ENST00000515810 BPTFQ12830 3046 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 HTTP42858 3142 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 CNOT1A5YKK6 2376 aaKnown RBP0.13□□□□□ -2.39
ATR-209ENST00000515810 KDM5DQ9BY66 1539 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 H3BUT2 72 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 DEFB121Q5J5C9 76 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 BVES-AS1Q5T3Y7 98 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 ATP5EP2Q5VTU8 51 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 HEPN1Q6WQI6 88 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 NCOA2Q15596 1464 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 PREX1Q8TCU6 1659 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 PRRC2CQ9Y520 2896 aaKnown RBP0.13□□□□□ -2.39
ATR-209ENST00000515810 DMBT1Q9UGM3 2413 aaPredicted RBP0.13□□□□□ -2.39
ATR-209ENST00000515810 USP32Q8NFA0 1604 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 ABCC1P33527 1531 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
ATR-209ENST00000515810 ABCA13Q86UQ4 5058 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 ARFGEF2Q9Y6D5 1785 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 HYDINQ4G0P3 5121 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 ZNF831Q5JPB2 1677 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 CFAP74Q9C0B2 1584 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 CEP170BQ9Y4F5 1589 aaPredicted RBP0.12□□□□□ -2.39
ATR-209ENST00000515810 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 LPAP08519 4548 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 TNXBP22105 4242 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 A0A087WXM4 84 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 LOC730098B7Z3J9 87 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 CDKN2A-AS1Q9UH64 79 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 ALMS1Q8TCU4 4167 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 DOT1LQ8TEK3 1739 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 EPPK1P58107 5090 aaKnown RBP0.12□□□□□ -2.39
ATR-209ENST00000515810 MAGI3Q5TCQ9 1506 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 FLNCQ14315 2725 aa0.12□□□□□ -2.39
ATR-209ENST00000515810 RRBP1Q9P2E9 1410 aaKnown RBP0.12□□□□□ -2.39
ATR-209ENST00000515810 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
ATR-209ENST00000515810 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
ATR-209ENST00000515810 UMAD1C9J7I0 102 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 IFI6P09912 130 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 IFI27P40305 119 aaPredicted RBP0.11□□□□□ -2.39
ATR-209ENST00000515810 COX6B2Q6YFQ2 88 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 C18orf32Q8TCD1 76 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 PTPN23Q9H3S7 1636 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 AKAP13Q12802 2813 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 SCN11AQ9UI33 1791 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 ANKARQ7Z5J8 1434 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 RYR3Q15413 4870 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 ZZEF1O43149 2961 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 TNRC6CQ9HCJ0 1690 aaKnown RBP0.11□□□□□ -2.39
ATR-209ENST00000515810 NWD1Q149M9 1564 aa0.11□□□□□ -2.39
ATR-209ENST00000515810 CCDC88BA6NC98 1476 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 MAP1BP46821 2468 aaKnown RBP0.1□□□□□ -2.39
ATR-209ENST00000515810 WNK1Q9H4A3 2382 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 TENM2Q9NT68 2774 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 PRM1P04553 51 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 SMIM13P0DJ93 91 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 LELP1Q5T871 98 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 WFDC13Q8IUB5 93 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 CFAP43Q8NDM7 1665 aa0.1□□□□□ -2.39
ATR-209ENST00000515810 DSPP15924 2871 aaKnown RBP0.1□□□□□ -2.39
ATR-209ENST00000515810 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
ATR-209ENST00000515810 EP300Q09472 2414 aaPredicted RBP0.09□□□□□ -2.39
ATR-209ENST00000515810 NESP48681 1621 aa0.09□□□□□ -2.39
ATR-209ENST00000515810 HSPG2P98160 4391 aa0.09□□□□□ -2.39
ATR-209ENST00000515810 KNL1Q8NG31 2342 aa0.09□□□□□ -2.39
ATR-209ENST00000515810 MAP3K1Q13233 1512 aa0.09□□□□□ -2.39
ATR-209ENST00000515810 M0R2T5 61 aa0.09□□□□□ -2.4
ATR-209ENST00000515810 NDUFA3O95167 84 aa0.09□□□□□ -2.4
ATR-209ENST00000515810 NREPQ16612 68 aa0.09□□□□□ -2.4
ATR-209ENST00000515810 ABCA8O94911 1581 aa0.09□□□□□ -2.4
ATR-209ENST00000515810 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
ATR-209ENST00000515810 TNRC18O15417 2968 aaPredicted RBP0.09□□□□□ -2.4
ATR-209ENST00000515810 APC2O95996 2303 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 C4AP0C0L4 1744 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 C4BP0C0L5 1744 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 HERC1Q15751 4861 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 LCE6AA0A183 80 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 HMGA1P17096 107 aaKnown RBP0.08□□□□□ -2.4
ATR-209ENST00000515810 SPRR2DP22532 72 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 FLNBO75369 2602 aaKnown RBP0.08□□□□□ -2.4
ATR-209ENST00000515810 KALRNO60229 2985 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 PLCH1Q4KWH8 1693 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 USH2AO75445 5202 aa0.08□□□□□ -2.4
ATR-209ENST00000515810 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
ATR-209ENST00000515810 LRRIQ1Q96JM4 1722 aa0.07□□□□□ -2.4
ATR-209ENST00000515810 NF1P21359 2839 aa0.07□□□□□ -2.4
ATR-209ENST00000515810 ANKRD50Q9ULJ7 1429 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms