RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 LINC00032P0C843 101 aa-1.57□□□□□ -2.66
CENPE-207ENST00000515478 FAUP35544 74 aaKnown RBP-1.57□□□□□ -2.66
CENPE-207ENST00000515478 MAGI2Q86UL8 1455 aa-1.57□□□□□ -2.66
CENPE-207ENST00000515478 PLECQ15149 4684 aaKnown RBP-1.58□□□□□ -2.66
CENPE-207ENST00000515478 KIF20BQ96Q89 1820 aa-1.58□□□□□ -2.66
CENPE-207ENST00000515478 TCEAL7Q9BRU2 100 aa-1.58□□□□□ -2.66
CENPE-207ENST00000515478 VPS13DQ5THJ4 4388 aa-1.58□□□□□ -2.66
CENPE-207ENST00000515478 TRANK1O15050 2925 aa-1.59□□□□□ -2.66
CENPE-207ENST00000515478 MYO18BQ8IUG5 2567 aa-1.59□□□□□ -2.66
CENPE-207ENST00000515478 UBE2D4Q9Y2X8 147 aa-1.59□□□□□ -2.66
CENPE-207ENST00000515478 PRRC2CQ9Y520 2896 aaKnown RBP-1.59□□□□□ -2.66
CENPE-207ENST00000515478 TEX14Q8IWB6 1497 aa-1.6□□□□□ -2.67
CENPE-207ENST00000515478 DPY30Q9C005 99 aa-1.6□□□□□ -2.67
CENPE-207ENST00000515478 CRYBG1Q9Y4K1 1723 aa-1.6□□□□□ -2.67
CENPE-207ENST00000515478 NBASA2RRP1 2371 aa-1.61□□□□□ -2.67
CENPE-207ENST00000515478 LYSTQ99698 3801 aa-1.61□□□□□ -2.67
CENPE-207ENST00000515478 COX7BP24311 80 aa-1.61□□□□□ -2.67
CENPE-207ENST00000515478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.61□□□□□ -2.67
CENPE-207ENST00000515478 KNL1Q8NG31 2342 aa-1.61□□□□□ -2.67
CENPE-207ENST00000515478 TACC2O95359 2948 aa-1.61□□□□□ -2.67
CENPE-207ENST00000515478 NIPBLQ6KC79 2804 aaeCLIP-1.62□□□□□ -2.67
CENPE-207ENST00000515478 ATP6V1G2-DDX39BF2Z307 99 aa-1.62□□□□□ -2.67
CENPE-207ENST00000515478 MT1AP04731 61 aa-1.62□□□□□ -2.67
CENPE-207ENST00000515478 PREX1Q8TCU6 1659 aa-1.63□□□□□ -2.67
CENPE-207ENST00000515478 COX6B2Q6YFQ2 88 aa-1.63□□□□□ -2.67
CENPE-207ENST00000515478 RGPD2P0DJD1 1756 aa-1.63□□□□□ -2.67
CENPE-207ENST00000515478 CNTLNQ9NXG0 1405 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 H3BNG1 76 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 NDUFA3O95167 84 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 HTTP42858 3142 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 QSER1Q2KHR3 1735 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 DNAH9Q9NYC9 4486 aa-1.64□□□□□ -2.67
CENPE-207ENST00000515478 CLTCQ00610 1675 aaKnown RBP-1.64□□□□□ -2.67
CENPE-207ENST00000515478 LAMA3Q16787 3333 aa-1.65□□□□□ -2.67
CENPE-207ENST00000515478 RBP2P50120 134 aa-1.65□□□□□ -2.67
CENPE-207ENST00000515478 PKD1L3Q7Z443 1732 aa-1.66□□□□□ -2.67
CENPE-207ENST00000515478 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.66□□□□□ -2.67
CENPE-207ENST00000515478 RPL38P63173 70 aaKnown RBP-1.66□□□□□ -2.68
CENPE-207ENST00000515478 EPRSP07814 1512 aaKnown RBP-1.66□□□□□ -2.68
CENPE-207ENST00000515478 SPG11Q96JI7 2443 aa-1.67□□□□□ -2.68
CENPE-207ENST00000515478 ACBD7Q8N6N7 88 aa-1.67□□□□□ -2.68
CENPE-207ENST00000515478 DSPP15924 2871 aaKnown RBP-1.68□□□□□ -2.68
CENPE-207ENST00000515478 LRRC9Q6ZRR7 1453 aa-1.68□□□□□ -2.68
CENPE-207ENST00000515478 USP9XQ93008 2570 aaPredicted RBP-1.68□□□□□ -2.68
CENPE-207ENST00000515478 UBR3Q6ZT12 1888 aa-1.68□□□□□ -2.68
CENPE-207ENST00000515478 AKAP9Q99996 3911 aa-1.69□□□□□ -2.68
CENPE-207ENST00000515478 LRRC7Q96NW7 1537 aa-1.69□□□□□ -2.68
CENPE-207ENST00000515478 FANCAO15360 1455 aa-1.69□□□□□ -2.68
CENPE-207ENST00000515478 A0A1B0GUT8 65 aa-1.7□□□□□ -2.68
CENPE-207ENST00000515478 NCMAPQ5T1S8 102 aa-1.7□□□□□ -2.68
CENPE-207ENST00000515478 GAFA1Q96PS6 74 aa-1.7□□□□□ -2.68
CENPE-207ENST00000515478 ANK3Q12955 4377 aaKnown RBP-1.7□□□□□ -2.68
CENPE-207ENST00000515478 RGPD8O14715 1765 aaPredicted RBP-1.71□□□□□ -2.68
CENPE-207ENST00000515478 RGPD5Q99666 1765 aa-1.71□□□□□ -2.68
CENPE-207ENST00000515478 ALKQ9UM73 1620 aa-1.71□□□□□ -2.68
CENPE-207ENST00000515478 CELSR3Q9NYQ7 3312 aa-1.71□□□□□ -2.68
CENPE-207ENST00000515478 WDR87Q6ZQQ6 2873 aa-1.72□□□□□ -2.68
CENPE-207ENST00000515478 CUBNO60494 3623 aa-1.72□□□□□ -2.68
CENPE-207ENST00000515478 IQCF6A8MYZ5 107 aa-1.72□□□□□ -2.68
CENPE-207ENST00000515478 HMGN2P05204 90 aaKnown RBP-1.72□□□□□ -2.68
CENPE-207ENST00000515478 ABCA13Q86UQ4 5058 aa-1.72□□□□□ -2.68
CENPE-207ENST00000515478 C4AP0C0L4 1744 aa-1.72□□□□□ -2.69
CENPE-207ENST00000515478 C4BP0C0L5 1744 aa-1.72□□□□□ -2.69
CENPE-207ENST00000515478 ATP10BO94823 1461 aa-1.73□□□□□ -2.69
CENPE-207ENST00000515478 PLGLAQ15195 96 aa-1.73□□□□□ -2.69
CENPE-207ENST00000515478 COL12A1Q99715 3063 aa-1.74□□□□□ -2.69
CENPE-207ENST00000515478 VPS13BQ7Z7G8 4022 aa-1.74□□□□□ -2.69
CENPE-207ENST00000515478 LAMA1P25391 3075 aa-1.75□□□□□ -2.69
CENPE-207ENST00000515478 PDE4DIPQ5VU43 2346 aa-1.75□□□□□ -2.69
CENPE-207ENST00000515478 C9orf92A6NGG3 77 aa-1.75□□□□□ -2.69
CENPE-207ENST00000515478 ATP7BP35670 1465 aa-1.75□□□□□ -2.69
CENPE-207ENST00000515478 DMXL1Q9Y485 3027 aa-1.76□□□□□ -2.69
CENPE-207ENST00000515478 M0R143 59 aa-1.76□□□□□ -2.69
CENPE-207ENST00000515478 SMIM11AP58511 58 aa-1.76□□□□□ -2.69
CENPE-207ENST00000515478 MYH4Q9Y623 1939 aa-1.76□□□□□ -2.69
CENPE-207ENST00000515478 RGPD1P0DJD0 1748 aa-1.77□□□□□ -2.69
CENPE-207ENST00000515478 PEA15Q15121 130 aa-1.77□□□□□ -2.69
CENPE-207ENST00000515478 CMYA5Q8N3K9 4069 aa-1.77□□□□□ -2.69
CENPE-207ENST00000515478 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.77□□□□□ -2.69
CENPE-207ENST00000515478 CYB5AP00167 134 aa-1.78□□□□□ -2.69
CENPE-207ENST00000515478 ZZEF1O43149 2961 aa-1.79□□□□□ -2.7
CENPE-207ENST00000515478 TEX15Q9BXT5 2789 aa-1.8□□□□□ -2.7
CENPE-207ENST00000515478 DYNC1H1Q14204 4646 aaKnown RBP-1.8□□□□□ -2.7
CENPE-207ENST00000515478 ANKRD50Q9ULJ7 1429 aa-1.8□□□□□ -2.7
CENPE-207ENST00000515478 GYPAP02724 150 aa-1.8□□□□□ -2.7
CENPE-207ENST00000515478 C20orf78Q9BR46 151 aa-1.8□□□□□ -2.7
CENPE-207ENST00000515478 ANKRD11Q6UB99 2663 aaPredicted RBP-1.81□□□□□ -2.7
CENPE-207ENST00000515478 NEXMIFQ5QGS0 1516 aa-1.81□□□□□ -2.7
CENPE-207ENST00000515478 TRAV21A0A0B4J279 112 aa-1.82□□□□□ -2.7
CENPE-207ENST00000515478 PRO3102Q9H379 93 aa-1.82□□□□□ -2.7
CENPE-207ENST00000515478 DNAH7Q8WXX0 4024 aa-1.82□□□□□ -2.7
CENPE-207ENST00000515478 ABCC10Q5T3U5 1492 aa-1.82□□□□□ -2.7
CENPE-207ENST00000515478 C3orf79P0CE67 100 aa-1.83□□□□□ -2.7
CENPE-207ENST00000515478 WFDC9Q8NEX5 89 aa-1.83□□□□□ -2.7
CENPE-207ENST00000515478 MYO3AQ8NEV4 1616 aa-1.84□□□□□ -2.7
CENPE-207ENST00000515478 APOBP04114 4563 aaKnown RBP-1.84□□□□□ -2.7
CENPE-207ENST00000515478 PEG3Q9GZU2 1588 aa-1.84□□□□□ -2.7
CENPE-207ENST00000515478 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.84□□□□□ -2.7
CENPE-207ENST00000515478 LINC00158P58513 81 aa-1.84□□□□□ -2.7
CENPE-207ENST00000515478 SUPT6HQ7KZ85 1726 aaKnown RBP-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms