RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 C2orf91Q6ZV80 131 aa4.7□□□□□ -1.66
HMGXB3-204ENST00000513318 PSORS1C2Q9UIG4 136 aa4.7□□□□□ -1.66
HMGXB3-204ENST00000513318 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 IGKV2-28A0A075B6P5 120 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 RPL37AP8A6NKH3 93 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 IGKV2D-28P01615 120 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 HIST1H4GQ99525 98 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 UQCR10Q9UDW1 63 aa4.69□□□□□ -1.66
HMGXB3-204ENST00000513318 PRYO14603 147 aa4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP10-4P60372 401 aaPredicted RBP4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 TAL2Q16559 108 aa4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 C1orf137Q5JT78 98 aa4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 S100A7L2Q5SY68 101 aa4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
HMGXB3-204ENST00000513318 TRBV10-3A0A0K0K1G6 114 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 IGLV6-57P01721 117 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 REG3GQ6UW15 175 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 CBY1Q9Y3M2 126 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 FAT1Q14517 4588 aa4.67□□□□□ -1.66
HMGXB3-204ENST00000513318 A4D1N5 150 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 BCE1O60756 84 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 IGLV7-43P04211 117 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 HNRNPA3P51991 378 aaKnown RBP4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 HSD52Q0P140 79 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 LINC00337Q8N6G1 96 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 OR13C6PQ8NH95 151 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 SNHG12Q9BXW3 62 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 KCNQ1DNQ9H478 68 aa4.66□□□□□ -1.66
HMGXB3-204ENST00000513318 TRAV23DV6A0A075B6W5 121 aa4.65□□□□□ -1.67
HMGXB3-204ENST00000513318 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
HMGXB3-204ENST00000513318 SPRR1AP35321 89 aa4.65□□□□□ -1.67
HMGXB3-204ENST00000513318 CEND1Q8N111 149 aa4.65□□□□□ -1.67
HMGXB3-204ENST00000513318 HERC2O95714 4834 aa4.65□□□□□ -1.67
HMGXB3-204ENST00000513318 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 UBE2AP49459 152 aa4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 SPINK6Q6UWN8 80 aa4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 FLG2Q5D862 2391 aaPredicted RBP4.64□□□□□ -1.67
HMGXB3-204ENST00000513318 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 ETDCA0A1B0GVM5 59 aa4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 A6NDN8 102 aa4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 M0R143 59 aa4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 ZNF73O43830 326 aaPredicted RBP4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 ZNF861PO60384 105 aa4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 PRLHP81277 87 aa4.63□□□□□ -1.67
HMGXB3-204ENST00000513318 A0A0B4J2C4 111 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 B5MCH6 92 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 H0Y9J4 135 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 INAFM2P0DMQ5 153 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 HINT1P49773 126 aaPredicted RBP4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 FXYD2P54710 66 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 KRTAP13-1Q8IUC0 172 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 DIRC1Q969H9 104 aa4.62□□□□□ -1.67
HMGXB3-204ENST00000513318 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
HMGXB3-204ENST00000513318 CFC1P0CG37 223 aa4.61□□□□□ -1.67
HMGXB3-204ENST00000513318 RPL13AP40429 203 aaKnown RBP4.61□□□□□ -1.67
HMGXB3-204ENST00000513318 Q6ZRX8 168 aa4.61□□□□□ -1.67
HMGXB3-204ENST00000513318 RAB37Q96AX2 223 aa4.61□□□□□ -1.67
HMGXB3-204ENST00000513318 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
HMGXB3-204ENST00000513318 SMIM11BQ8TCY0 68 aa4.6□□□□□ -1.67
HMGXB3-204ENST00000513318 TRBV7-6A0A0J9YX20 115 aa4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 A0A1B0GV90 55 aa4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 A0A1B0GWB2 263 aa4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 PRO1854Q9UHT4 67 aa4.59□□□□□ -1.67
HMGXB3-204ENST00000513318 COX7BP24311 80 aa4.58□□□□□ -1.68
HMGXB3-204ENST00000513318 ELOF1P60002 83 aaKnown RBP4.58□□□□□ -1.68
HMGXB3-204ENST00000513318 BVES-AS1Q5T3Y7 98 aa4.58□□□□□ -1.68
HMGXB3-204ENST00000513318 Q1RN00 199 aa4.57□□□□□ -1.68
HMGXB3-204ENST00000513318 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
HMGXB3-204ENST00000513318 SMCR5Q8TEV8 140 aa4.57□□□□□ -1.68
HMGXB3-204ENST00000513318 Q9BRP9 147 aa4.57□□□□□ -1.68
HMGXB3-204ENST00000513318 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
HMGXB3-204ENST00000513318 H7C2G1 150 aa4.56□□□□□ -1.68
HMGXB3-204ENST00000513318 K7ERJ3 54 aa4.56□□□□□ -1.68
HMGXB3-204ENST00000513318 VAMP3Q15836 100 aa4.56□□□□□ -1.68
HMGXB3-204ENST00000513318 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
HMGXB3-204ENST00000513318 ZNF706Q9Y5V0 76 aaPredicted RBP4.56□□□□□ -1.68
HMGXB3-204ENST00000513318 OXTP01178 125 aa4.55□□□□□ -1.68
HMGXB3-204ENST00000513318 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
HMGXB3-204ENST00000513318 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
HMGXB3-204ENST00000513318 SLC25A20O43772 301 aa4.54□□□□□ -1.68
HMGXB3-204ENST00000513318 ERC2-IT1O76042 136 aa4.54□□□□□ -1.68
HMGXB3-204ENST00000513318 LINC01600Q96MT4 127 aa4.54□□□□□ -1.68
HMGXB3-204ENST00000513318 SPRR4Q96PI1 79 aa4.54□□□□□ -1.68
HMGXB3-204ENST00000513318 H0YGX0 51 aa4.53□□□□□ -1.68
HMGXB3-204ENST00000513318 TSPAN13O95857 204 aa4.53□□□□□ -1.68
HMGXB3-204ENST00000513318 BATFQ16520 125 aa4.53□□□□□ -1.68
HMGXB3-204ENST00000513318 FAM229BQ4G0N7 80 aa4.53□□□□□ -1.68
HMGXB3-204ENST00000513318 LINC00575Q6W349 94 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms