RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ERVK-7P63135 1459 aa0.34□□□□□ -2.36
RFC1-214ENST00000512726 FLNCQ14315 2725 aa0.34□□□□□ -2.36
RFC1-214ENST00000512726 KMT2AQ03164 3969 aa0.34□□□□□ -2.36
RFC1-214ENST00000512726 PIK3C2BO00750 1634 aa0.31□□□□□ -2.36
RFC1-214ENST00000512726 NCOA2Q15596 1464 aa0.3□□□□□ -2.36
RFC1-214ENST00000512726 SPRR2DP22532 72 aa0.3□□□□□ -2.36
RFC1-214ENST00000512726 KMT2DO14686 5537 aa0.3□□□□□ -2.36
RFC1-214ENST00000512726 CEP170BQ9Y4F5 1589 aaPredicted RBP0.29□□□□□ -2.36
RFC1-214ENST00000512726 ZNF831Q5JPB2 1677 aa0.29□□□□□ -2.36
RFC1-214ENST00000512726 LELP1Q5T871 98 aa0.28□□□□□ -2.36
RFC1-214ENST00000512726 COX6B2Q6YFQ2 88 aa0.28□□□□□ -2.36
RFC1-214ENST00000512726 MYCBP2O75592 4640 aa0.28□□□□□ -2.36
RFC1-214ENST00000512726 DOT1LQ8TEK3 1739 aa0.27□□□□□ -2.37
RFC1-214ENST00000512726 H3BUT2 72 aa0.27□□□□□ -2.37
RFC1-214ENST00000512726 ATP5EP2Q5VTU8 51 aa0.27□□□□□ -2.37
RFC1-214ENST00000512726 MAGI3Q5TCQ9 1506 aa0.27□□□□□ -2.37
RFC1-214ENST00000512726 KDM5DQ9BY66 1539 aa0.27□□□□□ -2.37
RFC1-214ENST00000512726 APC2O95996 2303 aa0.26□□□□□ -2.37
RFC1-214ENST00000512726 KNL1Q8NG31 2342 aa0.26□□□□□ -2.37
RFC1-214ENST00000512726 M0R2T5 61 aa0.25□□□□□ -2.37
RFC1-214ENST00000512726 ARFGEF2Q9Y6D5 1785 aa0.24□□□□□ -2.37
RFC1-214ENST00000512726 DEFB121Q5J5C9 76 aa0.24□□□□□ -2.37
RFC1-214ENST00000512726 WFDC13Q8IUB5 93 aa0.24□□□□□ -2.37
RFC1-214ENST00000512726 ABCC1P33527 1531 aa0.23□□□□□ -2.37
RFC1-214ENST00000512726 DCHS2Q6V1P9 2916 aa0.23□□□□□ -2.37
RFC1-214ENST00000512726 TNRC6CQ9HCJ0 1690 aaKnown RBP0.23□□□□□ -2.37
RFC1-214ENST00000512726 SETXQ7Z333 2677 aaKnown RBP0.22□□□□□ -2.37
RFC1-214ENST00000512726 BVES-AS1Q5T3Y7 98 aa0.22□□□□□ -2.37
RFC1-214ENST00000512726 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
RFC1-214ENST00000512726 REV3LO60673 3130 aa0.21□□□□□ -2.38
RFC1-214ENST00000512726 NWD1Q149M9 1564 aa0.21□□□□□ -2.38
RFC1-214ENST00000512726 UMAD1C9J7I0 102 aa0.21□□□□□ -2.38
RFC1-214ENST00000512726 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
RFC1-214ENST00000512726 LPAP08519 4548 aa0.2□□□□□ -2.38
RFC1-214ENST00000512726 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
RFC1-214ENST00000512726 CFAP74Q9C0B2 1584 aa0.19□□□□□ -2.38
RFC1-214ENST00000512726 A0A087WXM4 84 aa0.19□□□□□ -2.38
RFC1-214ENST00000512726 IFI27P40305 119 aaPredicted RBP0.19□□□□□ -2.38
RFC1-214ENST00000512726 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
RFC1-214ENST00000512726 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
RFC1-214ENST00000512726 NESP48681 1621 aa0.17□□□□□ -2.38
RFC1-214ENST00000512726 SCN11AQ9UI33 1791 aa0.17□□□□□ -2.38
RFC1-214ENST00000512726 IFI6P09912 130 aa0.17□□□□□ -2.38
RFC1-214ENST00000512726 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
RFC1-214ENST00000512726 CCDC88BA6NC98 1476 aa0.16□□□□□ -2.38
RFC1-214ENST00000512726 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
RFC1-214ENST00000512726 NDUFA3O95167 84 aa0.16□□□□□ -2.38
RFC1-214ENST00000512726 C4AP0C0L4 1744 aa0.15□□□□□ -2.39
RFC1-214ENST00000512726 C4BP0C0L5 1744 aa0.15□□□□□ -2.39
RFC1-214ENST00000512726 RRBP1Q9P2E9 1410 aaKnown RBP0.14□□□□□ -2.39
RFC1-214ENST00000512726 SMIM13P0DJ93 91 aa0.14□□□□□ -2.39
RFC1-214ENST00000512726 ALMS1Q8TCU4 4167 aa0.14□□□□□ -2.39
RFC1-214ENST00000512726 DEFB135Q30KP9 77 aa0.13□□□□□ -2.39
RFC1-214ENST00000512726 CFAP43Q8NDM7 1665 aa0.12□□□□□ -2.39
RFC1-214ENST00000512726 PTPN23Q9H3S7 1636 aa0.12□□□□□ -2.39
RFC1-214ENST00000512726 HSPG2P98160 4391 aa0.11□□□□□ -2.39
RFC1-214ENST00000512726 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
RFC1-214ENST00000512726 NREPQ16612 68 aa0.1□□□□□ -2.39
RFC1-214ENST00000512726 C18orf32Q8TCD1 76 aa0.1□□□□□ -2.39
RFC1-214ENST00000512726 PDE4DIPQ5VU43 2346 aa0.09□□□□□ -2.39
RFC1-214ENST00000512726 ACANP16112 2415 aa0.08□□□□□ -2.4
RFC1-214ENST00000512726 ANKARQ7Z5J8 1434 aa0.07□□□□□ -2.4
RFC1-214ENST00000512726 LCE6AA0A183 80 aa0.07□□□□□ -2.4
RFC1-214ENST00000512726 HECTD4Q9Y4D8 3996 aa0.06□□□□□ -2.4
RFC1-214ENST00000512726 TRANK1O15050 2925 aa0.05□□□□□ -2.4
RFC1-214ENST00000512726 SPRR2BP35325 72 aa0.05□□□□□ -2.4
RFC1-214ENST00000512726 PLCH1Q4KWH8 1693 aa0.05□□□□□ -2.4
RFC1-214ENST00000512726 NDUFA4O00483 81 aa0.04□□□□□ -2.4
RFC1-214ENST00000512726 HMGA1P17096 107 aaKnown RBP0.04□□□□□ -2.4
RFC1-214ENST00000512726 CICQ96RK0 1608 aaPredicted RBP0.03□□□□□ -2.4
RFC1-214ENST00000512726 C3orf79P0CE67 100 aa0.03□□□□□ -2.4
RFC1-214ENST00000512726 PRO3102Q9H379 93 aa0.03□□□□□ -2.4
RFC1-214ENST00000512726 DDX60LQ5H9U9 1706 aaKnown RBP0.03□□□□□ -2.4
RFC1-214ENST00000512726 ABCA8O94911 1581 aa0.02□□□□□ -2.41
RFC1-214ENST00000512726 MAP3K1Q13233 1512 aa0.01□□□□□ -2.41
RFC1-214ENST00000512726 PCNX1Q96RV3 2341 aa0.01□□□□□ -2.41
RFC1-214ENST00000512726 RICTORQ6R327 1708 aa0□□□□□ -2.41
RFC1-214ENST00000512726 ZANQ9Y493 2812 aa-0.01□□□□□ -2.41
RFC1-214ENST00000512726 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
RFC1-214ENST00000512726 TENM2Q9NT68 2774 aa-0.02□□□□□ -2.41
RFC1-214ENST00000512726 ANKRD50Q9ULJ7 1429 aa-0.04□□□□□ -2.42
RFC1-214ENST00000512726 LINC00158P58513 81 aa-0.04□□□□□ -2.42
RFC1-214ENST00000512726 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
RFC1-214ENST00000512726 ADAMTS12P58397 1594 aa-0.05□□□□□ -2.42
RFC1-214ENST00000512726 COL6A3P12111 3177 aa-0.05□□□□□ -2.42
RFC1-214ENST00000512726 CD163L1Q9NR16 1453 aa-0.06□□□□□ -2.42
RFC1-214ENST00000512726 WIZO95785 1651 aa-0.07□□□□□ -2.42
RFC1-214ENST00000512726 PLXNC1O60486 1568 aa-0.07□□□□□ -2.42
RFC1-214ENST00000512726 NBASA2RRP1 2371 aa-0.08□□□□□ -2.42
RFC1-214ENST00000512726 LRP2P98164 4655 aa-0.08□□□□□ -2.42
RFC1-214ENST00000512726 LRRIQ1Q96JM4 1722 aa-0.09□□□□□ -2.42
RFC1-214ENST00000512726 H0YGG7 62 aa-0.09□□□□□ -2.42
RFC1-214ENST00000512726 STAB1Q9NY15 2570 aa-0.09□□□□□ -2.42
RFC1-214ENST00000512726 DEPDC5O75140 1603 aa-0.11□□□□□ -2.43
RFC1-214ENST00000512726 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.11□□□□□ -2.43
RFC1-214ENST00000512726 AKAP13Q12802 2813 aa-0.12□□□□□ -2.43
RFC1-214ENST00000512726 MYO5CQ9NQX4 1742 aa-0.12□□□□□ -2.43
RFC1-214ENST00000512726 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
RFC1-214ENST00000512726 DEFA5Q01523 94 aa-0.14□□□□□ -2.43
RFC1-214ENST00000512726 HECTD1Q9ULT8 2610 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms