RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 ACACBO00763 2458 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 M0R2T5 61 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 COX7BP24311 80 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 MAGI2Q86UL8 1455 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 ZANQ9Y493 2812 aa-0.12□□□□□ -2.43
SMN2-211ENST00000511873 CLIP1P30622 1438 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 ALKQ9UM73 1620 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 RGPD1P0DJD0 1748 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 APC2O95996 2303 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 MYMXA0A1B0GTQ4 84 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 CCL22O00626 93 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 GNG2P59768 71 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 GAFA1Q96PS6 74 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 EPPK1P58107 5090 aaKnown RBP-0.13□□□□□ -2.43
SMN2-211ENST00000511873 FLNBO75369 2602 aaKnown RBP-0.13□□□□□ -2.43
SMN2-211ENST00000511873 LRRC7Q96NW7 1537 aa-0.13□□□□□ -2.43
SMN2-211ENST00000511873 ATP7BP35670 1465 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 USH2AO75445 5202 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 PDZD2O15018 2839 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 SNRPFP62306 86 aaKnown RBP-0.14□□□□□ -2.43
SMN2-211ENST00000511873 TDRG1Q3Y452 100 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 ABCC3O15438 1527 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 BCORQ6W2J9 1755 aa-0.14□□□□□ -2.43
SMN2-211ENST00000511873 SMARCA2P51531 1590 aa-0.15□□□□□ -2.43
SMN2-211ENST00000511873 QSER1Q2KHR3 1735 aa-0.15□□□□□ -2.43
SMN2-211ENST00000511873 CDKN2A-AS1Q9UH64 79 aa-0.15□□□□□ -2.43
SMN2-211ENST00000511873 MAP1AP78559 2803 aaPredicted RBP-0.15□□□□□ -2.43
SMN2-211ENST00000511873 LPAP08519 4548 aa-0.15□□□□□ -2.43
SMN2-211ENST00000511873 REV3LO60673 3130 aa-0.16□□□□□ -2.43
SMN2-211ENST00000511873 TRAV21A0A0B4J279 112 aa-0.16□□□□□ -2.44
SMN2-211ENST00000511873 LINC00643Q86TS7 51 aa-0.16□□□□□ -2.44
SMN2-211ENST00000511873 WFDC13Q8IUB5 93 aa-0.16□□□□□ -2.44
SMN2-211ENST00000511873 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.44
SMN2-211ENST00000511873 FAT3Q8TDW7 4589 aa-0.17□□□□□ -2.44
SMN2-211ENST00000511873 MYO18BQ8IUG5 2567 aa-0.17□□□□□ -2.44
SMN2-211ENST00000511873 USP9XQ93008 2570 aaPredicted RBP-0.17□□□□□ -2.44
SMN2-211ENST00000511873 CEBPZOSA8MTT3 80 aa-0.18□□□□□ -2.44
SMN2-211ENST00000511873 SPRR2BP35325 72 aa-0.18□□□□□ -2.44
SMN2-211ENST00000511873 WFDC9Q8NEX5 89 aa-0.18□□□□□ -2.44
SMN2-211ENST00000511873 RABAC1Q9UI14 185 aa-0.18□□□□□ -2.44
SMN2-211ENST00000511873 TMEM131LA2VDJ0 1609 aa-0.18□□□□□ -2.44
SMN2-211ENST00000511873 PPLO60437 1756 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 USP9YO00507 2555 aaPredicted RBP-0.19□□□□□ -2.44
SMN2-211ENST00000511873 KIF14Q15058 1648 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 AKAP13Q12802 2813 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 DEFB135Q30KP9 77 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 KNL1Q8NG31 2342 aa-0.19□□□□□ -2.44
SMN2-211ENST00000511873 CNOT1A5YKK6 2376 aaKnown RBP-0.19□□□□□ -2.44
SMN2-211ENST00000511873 HECTD4Q9Y4D8 3996 aa-0.2□□□□□ -2.44
SMN2-211ENST00000511873 SRRM2Q9UQ35 2752 aaKnown RBP-0.2□□□□□ -2.44
SMN2-211ENST00000511873 EPG5Q9HCE0 2579 aa-0.2□□□□□ -2.44
SMN2-211ENST00000511873 SUPT6HQ7KZ85 1726 aaKnown RBP-0.2□□□□□ -2.44
SMN2-211ENST00000511873 RPL38P63173 70 aaKnown RBP-0.2□□□□□ -2.44
SMN2-211ENST00000511873 DSPP15924 2871 aaKnown RBP-0.2□□□□□ -2.44
SMN2-211ENST00000511873 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
SMN2-211ENST00000511873 PRKDCP78527 4128 aaKnown RBP-0.21□□□□□ -2.44
SMN2-211ENST00000511873 LRRC9Q6ZRR7 1453 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 NDUFA3O95167 84 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 ACYP1P07311 99 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 LRP2P98164 4655 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 PREX1Q8TCU6 1659 aa-0.21□□□□□ -2.44
SMN2-211ENST00000511873 NBEAL1Q6ZS30 2694 aa-0.22□□□□□ -2.44
SMN2-211ENST00000511873 UACAQ9BZF9 1416 aa-0.22□□□□□ -2.45
SMN2-211ENST00000511873 TGP01266 2768 aa-0.23□□□□□ -2.45
SMN2-211ENST00000511873 USP32Q8NFA0 1604 aa-0.23□□□□□ -2.45
SMN2-211ENST00000511873 ZNF831Q5JPB2 1677 aa-0.23□□□□□ -2.45
SMN2-211ENST00000511873 POLR1AO95602 1720 aaPredicted RBP-0.23□□□□□ -2.45
SMN2-211ENST00000511873 LAMA3Q16787 3333 aa-0.23□□□□□ -2.45
SMN2-211ENST00000511873 LTN1O94822 1766 aa-0.24□□□□□ -2.45
SMN2-211ENST00000511873 KANTRA0A1W2PQU2 76 aa-0.24□□□□□ -2.45
SMN2-211ENST00000511873 MAP3K4Q9Y6R4 1608 aa-0.24□□□□□ -2.45
SMN2-211ENST00000511873 PCNX1Q96RV3 2341 aa-0.25□□□□□ -2.45
SMN2-211ENST00000511873 CCDC168Q8NDH2 2452 aa-0.25□□□□□ -2.45
SMN2-211ENST00000511873 NCOA2Q15596 1464 aa-0.25□□□□□ -2.45
SMN2-211ENST00000511873 LRRK2Q5S007 2527 aa-0.25□□□□□ -2.45
SMN2-211ENST00000511873 RGPD8O14715 1765 aaPredicted RBP-0.26□□□□□ -2.45
SMN2-211ENST00000511873 RGPD5Q99666 1765 aa-0.26□□□□□ -2.45
SMN2-211ENST00000511873 DOT1LQ8TEK3 1739 aa-0.26□□□□□ -2.45
SMN2-211ENST00000511873 NDUFB1O75438 58 aa-0.26□□□□□ -2.45
SMN2-211ENST00000511873 COX6B2Q6YFQ2 88 aa-0.26□□□□□ -2.45
SMN2-211ENST00000511873 PRRC2CQ9Y520 2896 aaKnown RBP-0.27□□□□□ -2.45
SMN2-211ENST00000511873 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.27□□□□□ -2.45
SMN2-211ENST00000511873 ADIRFQ15847 76 aa-0.28□□□□□ -2.45
SMN2-211ENST00000511873 ST20Q9HBF5 79 aa-0.28□□□□□ -2.45
SMN2-211ENST00000511873 URB2Q14146 1524 aaKnown RBP-0.28□□□□□ -2.45
SMN2-211ENST00000511873 MED14O60244 1454 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 LAMA2P24043 3122 aaKnown RBP-0.29□□□□□ -2.46
SMN2-211ENST00000511873 C4AP0C0L4 1744 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 C4BP0C0L5 1744 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 TIAM2Q8IVF5 1701 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 IFI6P09912 130 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 S100A13Q99584 98 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 RB1CC1Q8TDY2 1594 aa-0.29□□□□□ -2.46
SMN2-211ENST00000511873 ITPR3Q14573 2671 aa-0.3□□□□□ -2.46
SMN2-211ENST00000511873 PDE4DIPQ5VU43 2346 aa-0.3□□□□□ -2.46
SMN2-211ENST00000511873 ITPR1Q14643 2758 aa-0.3□□□□□ -2.46
SMN2-211ENST00000511873 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms