RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 C1orf134Q5TEV5 83 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 SPAG11AQ6PDA7 123 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 PLAC8Q9NZF1 115 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 PRR14LQ5THK1 2151 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 MALRD1Q5VYJ5 2156 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 ROS1P08922 2347 aa2.98□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGKV2-28A0A075B6P5 120 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 A6NDX4 124 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 M0QY20 66 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 RTL8CO15255 209 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGKV2D-28P01615 120 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 IGLV2-23P01705 113 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 TFF1P04155 84 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 C10orf55Q5SWW7 151 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 Q6ZTI0 123 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 LEAP2Q969E1 77 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 USMG5Q96IX5 58 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 CDKN2A-AS1Q9UH64 79 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 PLCE1Q9P212 2302 aa2.97□□□□□ -1.93
HMGB3P13-201ENST00000511263 ITPR1Q14643 2758 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV3OR16-8A0A075B7F1 116 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 K7EIM0 57 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 K7ERS5 55 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 COX7A1P24310 79 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 REG3AQ06141 175 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 KPRPQ5T749 579 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 Q8N9W7 124 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 PKDREJQ9NTG1 2253 aa2.96□□□□□ -1.94
HMGB3P13-201ENST00000511263 UBR5O95071 2799 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 CFAP46Q8IYW2 2715 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 PLXNB1O43157 2135 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 MYO18BQ8IUG5 2567 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 RNASE3P12724 160 aaKnown RBP2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 COA5Q86WW8 74 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 ZNRD1Q9P1U0 126 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 KALRNO60229 2985 aa2.95□□□□□ -1.94
HMGB3P13-201ENST00000511263 CHD6Q8TD26 2715 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 MUC4Q99102 2169 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 USP9YO00507 2555 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV3-21A0A0B4J1V1 117 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 LINC00158P58513 81 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 DEFB112Q30KQ8 113 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 LINC00575Q6W349 94 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 ZFAND2AQ8N6M9 145 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 C5orf56Q8N8D9 126 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 Q8NAQ8 132 aa2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 SMG1Q96Q15 3661 aaKnown RBP2.94□□□□□ -1.94
HMGB3P13-201ENST00000511263 SPG11Q96JI7 2443 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 ZFYVE26Q68DK2 2539 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 USP9XQ93008 2570 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV7-81A0A0B4J1V7 117 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 TRGV4A0A0C4DH28 118 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 A0A1W2PNM2 257 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 H3BUX3 64 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV3-23P01764 117 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 CCL18P55774 89 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 CMC4P56277 68 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 KRTAP13-3Q3SY46 172 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 BRD3OSQ6XYD6 125 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 LINC01006Q8NI28 216 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 FAM104AQ969W3 186 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 RELNP78509 3460 aa2.93□□□□□ -1.94
HMGB3P13-201ENST00000511263 NBEAQ8NFP9 2946 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 ADGRG4Q8IZF6 3080 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 TNCP24821 2201 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGLV11-55A0A075B6I3 123 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 A0A087WSZ3 146 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 SPENQ96T58 3664 aaKnown RBP2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 NAV2Q8IVL1 2488 aa2.92□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV3-74A0A0B4J1X5 117 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 IGHV3-66A0A0C4DH42 116 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 COX17Q14061 63 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 PRR4Q16378 134 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 CHCHD7Q9BUK0 85 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 HELZ2Q9BYK8 2649 aaKnown RBP2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 LRRK2Q5S007 2527 aa2.91□□□□□ -1.94
HMGB3P13-201ENST00000511263 PTPN13Q12923 2485 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 UQCR11O14957 56 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 IGHV3-11P01762 117 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 CHTF8P0CG12 524 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 SPINK7P58062 85 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 Q6ZQY7 126 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 Q8NDZ9 215 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 CAMK2N2Q96S95 79 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 FLNCQ14315 2725 aa2.9□□□□□ -1.95
HMGB3P13-201ENST00000511263 FASNP49327 2511 aaKnown RBP2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 IGLV8-61A0A075B6I0 122 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 GIG44P09565 113 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms