RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 I3L2K1 104 aa0.99□□□□□ -2.25
USP53-204ENST00000507906 POLR2KP53803 58 aaKnown RBP0.99□□□□□ -2.25
USP53-204ENST00000507906 WFDC9Q8NEX5 89 aa0.99□□□□□ -2.25
USP53-204ENST00000507906 LEAP2Q969E1 77 aa0.99□□□□□ -2.25
USP53-204ENST00000507906 SRCAPQ6ZRS2 3230 aa0.99□□□□□ -2.25
USP53-204ENST00000507906 TENM1Q9UKZ4 2725 aa0.99□□□□□ -2.25
USP53-204ENST00000507906 TRAV12-3A0A0B4J271 114 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 NBDYA0A0U1RRE5 68 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 LCE6AA0A183 80 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 K7EIM0 57 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 NDUFA1O15239 70 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 S100A7L2Q5SY68 101 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 LINC00575Q6W349 94 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 LINC00308Q8TCZ7 52 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 CCL19Q99731 98 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 NDUFA12Q9UI09 145 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 CEP250Q9BV73 2442 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 APC2O95996 2303 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 WDR87Q6ZQQ6 2873 aa0.98□□□□□ -2.25
USP53-204ENST00000507906 CEP350Q5VT06 3117 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 DNAH12Q6ZR08 3092 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 TRAV22A0A0B4J277 110 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 LOC101927531A0A1B0GV80 90 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 PPP1R17O96001 155 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 MGPP08493 103 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 NREPQ16612 68 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 SPANXN1Q5VSR9 72 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 Q5VV11 94 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 ENHOQ6UWT2 76 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 SMIM11BQ8TCY0 68 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 GAFA1Q96PS6 74 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 CYP4F30PQ9H0H9 118 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 ZFHX3Q15911 3703 aa0.97□□□□□ -2.25
USP53-204ENST00000507906 UNC80Q8N2C7 3258 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 A0A096LNT2 108 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 TRBV10-1A0A0K0K1A3 114 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 SPTY2D1-AS1A0A0U1RR47 76 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 CLPSL1A2RUU4 121 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 H0YGX0 51 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 MRPL33O75394 65 aaKnown RBP0.96□□□□□ -2.26
USP53-204ENST00000507906 KLK9Q2XQG4 91 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 DYNLRB2Q8TF09 96 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 LENEPQ9Y5L5 61 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.96□□□□□ -2.26
USP53-204ENST00000507906 NCOR1O75376 2440 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 MGAQ8IWI9 3026 aa0.96□□□□□ -2.26
USP53-204ENST00000507906 CNOT1A5YKK6 2376 aaKnown RBP0.96□□□□□ -2.26
USP53-204ENST00000507906 SZT2Q5T011 3432 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 ALMS1Q8TCU4 4167 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 EP400Q96L91 3159 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 ABCA2Q9BZC7 2435 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 CFAP47Q6ZTR5 3102 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 M0QY20 66 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 APELAP0DMC3 54 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 CCL3L1P16619 93 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 COX6A2Q02221 97 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 ATP11AUNQ6ZP68 121 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 Q6ZQY7 126 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 DEFB104AQ8WTQ1 72 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 UBL5Q9BZL1 73 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 PLAC8Q9NZF1 115 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 CDKN2A-AS1Q9UH64 79 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 PTPRZ1P23471 2315 aaPredicted RBP0.95□□□□□ -2.26
USP53-204ENST00000507906 ACACAQ13085 2346 aa0.95□□□□□ -2.26
USP53-204ENST00000507906 MKI67P46013 3256 aaKnown RBP0.95□□□□□ -2.26
USP53-204ENST00000507906 TRAV21A0A0B4J279 112 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 HCG22E2RYF7 251 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 CCL18P55774 89 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 DEFB133Q30KQ1 61 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 LINC00208Q96KT6 92 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 CDC42SE2Q9NRR3 84 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 UTRNP46939 3433 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 AKAP6Q13023 2319 aa0.94□□□□□ -2.26
USP53-204ENST00000507906 TPRP12270 2363 aaKnown RBP0.93□□□□□ -2.26
USP53-204ENST00000507906 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
USP53-204ENST00000507906 ELOF1P60002 83 aaKnown RBP0.93□□□□□ -2.26
USP53-204ENST00000507906 DEFB1P60022 68 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 HAMPP81172 84 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 DEFB114Q30KQ6 69 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 DEFB132Q7Z7B7 95 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 C5orf56Q8N8D9 126 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 DEFB108BQ8NET1 73 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 FDCSPQ8NFU4 85 aa0.93□□□□□ -2.26
USP53-204ENST00000507906 RANBP2P49792 3224 aaKnown RBP0.93□□□□□ -2.26
USP53-204ENST00000507906 CFAP54Q96N23 3096 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 WNK1Q9H4A3 2382 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 ZDBF2Q9HCK1 2354 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 A8MTW9 85 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 CHKB-CPT1BH3BT56 60 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 C9orf116Q5BN46 136 aaPredicted RBP0.92□□□□□ -2.26
USP53-204ENST00000507906 FAM74A4Q5TZK3 123 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 COX7B2Q8TF08 81 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 DMAC1Q96GE9 116 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 PRR15LQ9BU68 103 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 KAAG1Q9UBP8 84 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 LINC01558Q9Y6Z2 57 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 U3KQA8 63 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 VPS13AQ96RL7 3174 aa0.92□□□□□ -2.26
USP53-204ENST00000507906 C5orf42Q9H799 3197 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms