RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
SCLT1-207ENST00000506233 RPL28P46779 137 aaKnown RBP3.74□□□□□ -1.81
SCLT1-207ENST00000506233 UPK3BQ9BT76 320 aa3.74□□□□□ -1.81
SCLT1-207ENST00000506233 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
SCLT1-207ENST00000506233 INAFM2P0DMQ5 153 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 SMIM11BQ8TCY0 68 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 APLNQ9ULZ1 77 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 MGAM2Q2M2H8 2515 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 APOMO95445 188 aa3.73□□□□□ -1.81
SCLT1-207ENST00000506233 RYR1P21817 5038 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 PANO1I0J062 215 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 LGALS3P17931 250 aaKnown RBP3.72□□□□□ -1.81
SCLT1-207ENST00000506233 XCL1P47992 114 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 IGLV10-54A0A075B6I4 117 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 IBA57-AS1B1ANH7 110 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 M0R2N4 97 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 SPART-AS1P0CW21 52 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 LINC01556Q5JQF7 62 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 ANKRD29Q8N6D5 301 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 ETDBQ3ZM63 59 aa3.72□□□□□ -1.81
SCLT1-207ENST00000506233 TEX49A0A1B0GTD5 131 aa3.71□□□□□ -1.82
SCLT1-207ENST00000506233 ERG28Q9UKR5 140 aa3.71□□□□□ -1.82
SCLT1-207ENST00000506233 IFITM1P13164 125 aa3.71□□□□□ -1.82
SCLT1-207ENST00000506233 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.82
SCLT1-207ENST00000506233 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
SCLT1-207ENST00000506233 DAD1P61803 113 aa3.7□□□□□ -1.82
SCLT1-207ENST00000506233 FAM168BA1KXE4 195 aa3.69□□□□□ -1.82
SCLT1-207ENST00000506233 FABP2P12104 132 aa3.69□□□□□ -1.82
SCLT1-207ENST00000506233 SCGB1D4Q6XE38 83 aa3.69□□□□□ -1.82
SCLT1-207ENST00000506233 HERVK_113P61574 105 aa3.69□□□□□ -1.82
SCLT1-207ENST00000506233 NDUFC2O95298 119 aa3.69□□□□□ -1.82
SCLT1-207ENST00000506233 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 COX7A2LO14548 114 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 SPRR1AP35321 89 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 LINC00313P59037 77 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 COX17Q14061 63 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 KLK12Q9UKR0 248 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 TRBV10-2A0A0K0K1G8 114 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 PSMB2P49721 201 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 MP68P56378 58 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
SCLT1-207ENST00000506233 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
SCLT1-207ENST00000506233 Q9BRP9 147 aa3.67□□□□□ -1.82
SCLT1-207ENST00000506233 DEFB131BA0A096LNP1 70 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 ANGP03950 147 aaKnown RBP3.66□□□□□ -1.82
SCLT1-207ENST00000506233 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 MT-ATP8P03928 68 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 C3orf56Q8N813 242 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
SCLT1-207ENST00000506233 SLC25A20O43772 301 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
SCLT1-207ENST00000506233 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
SCLT1-207ENST00000506233 B9D2Q9BPU9 175 aa3.65□□□□□ -1.83
SCLT1-207ENST00000506233 UBE2L6O14933 153 aa3.65□□□□□ -1.83
SCLT1-207ENST00000506233 Q6ZR54 194 aa3.65□□□□□ -1.83
SCLT1-207ENST00000506233 GTF2H5Q6ZYL4 71 aa3.65□□□□□ -1.83
SCLT1-207ENST00000506233 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 OR13C6PQ8NH95 151 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 C8orf17Q9NRJ1 99 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 CXCL5P42830 114 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 A0A1B0GX51 115 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 C9JAW5 83 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 TRACP01848 142 aa3.64□□□□□ -1.83
SCLT1-207ENST00000506233 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
SCLT1-207ENST00000506233 LINC00575Q6W349 94 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 Q8N814 137 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 H7C2G1 150 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 SCGB1A1P11684 91 aa3.63□□□□□ -1.83
SCLT1-207ENST00000506233 ELOF1P60002 83 aaKnown RBP3.62□□□□□ -1.83
SCLT1-207ENST00000506233 TRBV10-3A0A0K0K1G6 114 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 HTN3P15516 51 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
SCLT1-207ENST00000506233 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 KCNQ1DNQ9H478 68 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 TMEM262E9PQX1 116 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 NCR3O14931 201 aa3.62□□□□□ -1.83
SCLT1-207ENST00000506233 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
SCLT1-207ENST00000506233 ERC2-IT1O76042 136 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 CIRBPQ14011 172 aaKnown RBP3.61□□□□□ -1.83
SCLT1-207ENST00000506233 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 XAGE1AQ9HD64 81 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 IGLV1-50A0A075B6I6 118 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 H3BT86 120 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 ATXN8Q156A1 80 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
SCLT1-207ENST00000506233 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 TOMM7Q9P0U1 55 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 M0R378 163 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 TRBV7-6A0A0J9YX20 115 aa3.6□□□□□ -1.83
SCLT1-207ENST00000506233 UBE2WQ96B02 151 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms