RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
NR1I3-222ENST00000506018 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 ARL17AQ8IVW1 177 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 CEND1Q8N111 149 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 DAND5Q8N907 189 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 SND1-IT1Q9HBX3 110 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 ZNF861PO60384 105 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 CTAG1AP78358 180 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
NR1I3-222ENST00000506018 NDUFC2O95298 119 aa6.3□□□□□ -1.4
NR1I3-222ENST00000506018 RPL28P46779 137 aaKnown RBP6.3□□□□□ -1.4
NR1I3-222ENST00000506018 NPC2P61916 151 aa6.3□□□□□ -1.4
NR1I3-222ENST00000506018 NKAPP1Q8N9T2 125 aa6.3□□□□□ -1.4
NR1I3-222ENST00000506018 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
NR1I3-222ENST00000506018 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
NR1I3-222ENST00000506018 A6NDN8 102 aa6.28□□□□□ -1.4
NR1I3-222ENST00000506018 BCE1O60756 84 aa6.27□□□□□ -1.41
NR1I3-222ENST00000506018 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 A4D1N5 150 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 HINT1P49773 126 aaPredicted RBP6.26□□□□□ -1.41
NR1I3-222ENST00000506018 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 LINC00167Q96N53 147 aa6.26□□□□□ -1.41
NR1I3-222ENST00000506018 LRP2P98164 4655 aa6.25□□□□□ -1.41
NR1I3-222ENST00000506018 IGLV5-37A0A075B6J1 123 aa6.25□□□□□ -1.41
NR1I3-222ENST00000506018 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
NR1I3-222ENST00000506018 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
NR1I3-222ENST00000506018 SOSTDC1Q6X4U4 206 aa6.25□□□□□ -1.41
NR1I3-222ENST00000506018 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
NR1I3-222ENST00000506018 GAGE10A6NGK3 116 aa6.24□□□□□ -1.41
NR1I3-222ENST00000506018 M0R378 163 aa6.24□□□□□ -1.41
NR1I3-222ENST00000506018 UBE2AP49459 152 aa6.24□□□□□ -1.41
NR1I3-222ENST00000506018 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
NR1I3-222ENST00000506018 VPREB1P12018 145 aa6.23□□□□□ -1.41
NR1I3-222ENST00000506018 FXYD2P54710 66 aa6.23□□□□□ -1.41
NR1I3-222ENST00000506018 BATFQ16520 125 aa6.23□□□□□ -1.41
NR1I3-222ENST00000506018 OR13C6PQ8NH95 151 aa6.23□□□□□ -1.41
NR1I3-222ENST00000506018 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
NR1I3-222ENST00000506018 NHP2Q9NX24 153 aaKnown RBP6.23□□□□□ -1.41
NR1I3-222ENST00000506018 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
NR1I3-222ENST00000506018 CFC1P0CG37 223 aa6.22□□□□□ -1.41
NR1I3-222ENST00000506018 CRYGAP11844 174 aa6.22□□□□□ -1.41
NR1I3-222ENST00000506018 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
NR1I3-222ENST00000506018 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.41
NR1I3-222ENST00000506018 NCR3O14931 201 aa6.21□□□□□ -1.41
NR1I3-222ENST00000506018 IGKV2D-28P01615 120 aa6.21□□□□□ -1.41
NR1I3-222ENST00000506018 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
NR1I3-222ENST00000506018 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
NR1I3-222ENST00000506018 PRR4Q16378 134 aa6.19□□□□□ -1.42
NR1I3-222ENST00000506018 Q1RN00 199 aa6.19□□□□□ -1.42
NR1I3-222ENST00000506018 COL5A1-AS1Q5SY13 56 aa6.19□□□□□ -1.42
NR1I3-222ENST00000506018 FAM19A1Q7Z5A9 133 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 COX6CP09669 75 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
NR1I3-222ENST00000506018 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 TRBV10-3A0A0K0K1G6 114 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 PRYO14603 147 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 VAMP3Q15836 100 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 Q8NDZ9 215 aa6.17□□□□□ -1.42
NR1I3-222ENST00000506018 A0A087X002 238 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
NR1I3-222ENST00000506018 H7C2G1 150 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 TSPAN13O95857 204 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 PSMB2P49721 201 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 PRLHP81277 87 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 LYRM7Q5U5X0 104 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
NR1I3-222ENST00000506018 K7ERJ3 54 aa6.15□□□□□ -1.43
NR1I3-222ENST00000506018 SNCGO76070 127 aa6.15□□□□□ -1.43
NR1I3-222ENST00000506018 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.43
NR1I3-222ENST00000506018 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
NR1I3-222ENST00000506018 TRBV7-6A0A0J9YX20 115 aa6.13□□□□□ -1.43
NR1I3-222ENST00000506018 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
NR1I3-222ENST00000506018 H0YGX0 51 aa6.13□□□□□ -1.43
NR1I3-222ENST00000506018 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
NR1I3-222ENST00000506018 SCGB1C2P0DMR2 95 aa6.13□□□□□ -1.43
NR1I3-222ENST00000506018 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
NR1I3-222ENST00000506018 ETDCA0A1B0GVM5 59 aa6.12□□□□□ -1.43
NR1I3-222ENST00000506018 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
NR1I3-222ENST00000506018 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
NR1I3-222ENST00000506018 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
NR1I3-222ENST00000506018 ANAPC11Q9NYG5 84 aa6.12□□□□□ -1.43
NR1I3-222ENST00000506018 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
NR1I3-222ENST00000506018 SLC25A20O43772 301 aa6.11□□□□□ -1.43
NR1I3-222ENST00000506018 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
NR1I3-222ENST00000506018 LPAP08519 4548 aa6.11□□□□□ -1.43
NR1I3-222ENST00000506018 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
NR1I3-222ENST00000506018 COX7BP24311 80 aa6.1□□□□□ -1.43
NR1I3-222ENST00000506018 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
NR1I3-222ENST00000506018 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms