RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 C3orf84H3BNL1 204 aa4.96□□□□□ -1.62
PDGFC-203ENST00000502773 C6orf223Q8N319 242 aa4.96□□□□□ -1.62
PDGFC-203ENST00000502773 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
PDGFC-203ENST00000502773 NUPR2A6NF83 97 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 SPATA3Q8NHX4 192 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
PDGFC-203ENST00000502773 LCA10Q71F78 164 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 ACANP16112 2415 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 Q6ZQY7 126 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 Q6ZRU5 148 aa4.95□□□□□ -1.62
PDGFC-203ENST00000502773 MTORP42345 2549 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 XAGE1AQ9HD64 81 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 APCP25054 2843 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 NDUFB1O75438 58 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 C10orf25Q5T742 122 aa4.94□□□□□ -1.62
PDGFC-203ENST00000502773 NOTCH2Q04721 2471 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 UNC79Q9P2D8 2635 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 ASH1LQ9NR48 2969 aaKnown RBP4.93□□□□□ -1.62
PDGFC-203ENST00000502773 FN1P02751 2386 aaKnown RBP4.93□□□□□ -1.62
PDGFC-203ENST00000502773 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 CXCL6P80162 114 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
PDGFC-203ENST00000502773 FASNP49327 2511 aaKnown RBP4.93□□□□□ -1.62
PDGFC-203ENST00000502773 RPL37AP8A6NKH3 93 aa4.92□□□□□ -1.62
PDGFC-203ENST00000502773 KMT2BQ9UMN6 2715 aaPredicted RBP4.92□□□□□ -1.62
PDGFC-203ENST00000502773 DCHS2Q6V1P9 2916 aa4.92□□□□□ -1.62
PDGFC-203ENST00000502773 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
PDGFC-203ENST00000502773 RETNLBQ9BQ08 111 aa4.92□□□□□ -1.62
PDGFC-203ENST00000502773 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
PDGFC-203ENST00000502773 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 B9D2Q9BPU9 175 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 LINC00588Q9Y4M8 146 aa4.91□□□□□ -1.62
PDGFC-203ENST00000502773 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.62
PDGFC-203ENST00000502773 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.62
PDGFC-203ENST00000502773 HELZ2Q9BYK8 2649 aaKnown RBP4.9□□□□□ -1.62
PDGFC-203ENST00000502773 Q6ZQT0 140 aa4.9□□□□□ -1.63
PDGFC-203ENST00000502773 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
PDGFC-203ENST00000502773 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
PDGFC-203ENST00000502773 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.63
PDGFC-203ENST00000502773 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
PDGFC-203ENST00000502773 LINC00528Q8N1L1 170 aa4.89□□□□□ -1.63
PDGFC-203ENST00000502773 K7EIL1 84 aa4.89□□□□□ -1.63
PDGFC-203ENST00000502773 C9orf129Q5T035 196 aaKnown RBP4.87□□□□□ -1.63
PDGFC-203ENST00000502773 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 FBN2P35556 2912 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 CENPEQ02224 2701 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 C16orf90A8MZG2 172 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 CNBPP62633 177 aaKnown RBP4.87□□□□□ -1.63
PDGFC-203ENST00000502773 Q6ZRP5 223 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 RELNP78509 3460 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 CHD6Q8TD26 2715 aa4.87□□□□□ -1.63
PDGFC-203ENST00000502773 Q6ZRX8 168 aa4.86□□□□□ -1.63
PDGFC-203ENST00000502773 TRBV7-4A0A0J9YYF1 115 aa4.86□□□□□ -1.63
PDGFC-203ENST00000502773 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
PDGFC-203ENST00000502773 C22orf24Q9Y442 160 aa4.86□□□□□ -1.63
PDGFC-203ENST00000502773 F8P00451 2351 aa4.85□□□□□ -1.63
PDGFC-203ENST00000502773 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
PDGFC-203ENST00000502773 JMJD1CQ15652 2540 aa4.85□□□□□ -1.63
PDGFC-203ENST00000502773 SMIM29Q86T20 159 aa4.85□□□□□ -1.63
PDGFC-203ENST00000502773 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
PDGFC-203ENST00000502773 PDZD2O15018 2839 aa4.84□□□□□ -1.63
PDGFC-203ENST00000502773 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
PDGFC-203ENST00000502773 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
PDGFC-203ENST00000502773 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 SPRR1AP35321 89 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 H0Y9J4 135 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 APLNQ9ULZ1 77 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
PDGFC-203ENST00000502773 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 ZANQ9Y493 2812 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 NBDYA0A0U1RRE5 68 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 CYP4F30PQ9H0H9 118 aa4.81□□□□□ -1.64
PDGFC-203ENST00000502773 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
PDGFC-203ENST00000502773 SETXQ7Z333 2677 aaKnown RBP4.8□□□□□ -1.64
PDGFC-203ENST00000502773 Q1T7F1 81 aa4.8□□□□□ -1.64
PDGFC-203ENST00000502773 HECTD1Q9ULT8 2610 aa4.8□□□□□ -1.64
PDGFC-203ENST00000502773 RPL37AP61513 92 aaKnown RBP4.79□□□□□ -1.64
PDGFC-203ENST00000502773 CELSR2Q9HCU4 2923 aa4.79□□□□□ -1.64
PDGFC-203ENST00000502773 Q8NBF4 154 aa4.79□□□□□ -1.64
PDGFC-203ENST00000502773 PRR26Q8N8Z3 221 aa4.79□□□□□ -1.64
PDGFC-203ENST00000502773 CUBNO60494 3623 aa4.78□□□□□ -1.64
PDGFC-203ENST00000502773 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
PDGFC-203ENST00000502773 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
PDGFC-203ENST00000502773 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
PDGFC-203ENST00000502773 Q8NDZ9 215 aa4.78□□□□□ -1.64
PDGFC-203ENST00000502773 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
PDGFC-203ENST00000502773 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms