RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ABCA12Q86UK0 2595 aa1.53□□□□□ -2.16
CALD1-224ENST00000498254 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
CALD1-224ENST00000498254 CPSF4LA6NMK7 179 aaKnown RBP1.53□□□□□ -2.16
CALD1-224ENST00000498254 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
CALD1-224ENST00000498254 BRWD1Q9NSI6 2320 aa1.53□□□□□ -2.16
CALD1-224ENST00000498254 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
CALD1-224ENST00000498254 C5orf56Q8N8D9 126 aa1.52□□□□□ -2.17
CALD1-224ENST00000498254 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
CALD1-224ENST00000498254 ABCA4P78363 2273 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 UNC13CQ8NB66 2214 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 CELSR3Q9NYQ7 3312 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 A0A1B0GU69 56 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 ETDCA0A1B0GVM5 59 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 FXYD4P59646 89 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 C4orf3Q8WVX3 66 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 SORL1Q92673 2214 aa1.51□□□□□ -2.17
CALD1-224ENST00000498254 GCN1Q92616 2671 aaKnown RBP1.51□□□□□ -2.17
CALD1-224ENST00000498254 H0YGX0 51 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 ACYP2P14621 99 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 COX7BP24311 80 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
CALD1-224ENST00000498254 COX17Q14061 63 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 DEFB114Q30KQ6 69 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 DEFB132Q7Z7B7 95 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 ARHGAP5-AS1Q96IT6 56 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 KCNQ1DNQ9H478 68 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 VWFP04275 2813 aa1.5□□□□□ -2.17
CALD1-224ENST00000498254 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
CALD1-224ENST00000498254 JMJD1CQ15652 2540 aa1.49□□□□□ -2.17
CALD1-224ENST00000498254 H3BSH0 61 aa1.49□□□□□ -2.17
CALD1-224ENST00000498254 CFAP47Q6ZTR5 3102 aa1.49□□□□□ -2.17
CALD1-224ENST00000498254 BPTFQ12830 3046 aa1.49□□□□□ -2.17
CALD1-224ENST00000498254 TNRC6CQ9HCJ0 1690 aaKnown RBP1.48□□□□□ -2.17
CALD1-224ENST00000498254 C10orf55Q5SWW7 151 aa1.48□□□□□ -2.17
CALD1-224ENST00000498254 Q6ZQY7 126 aa1.48□□□□□ -2.17
CALD1-224ENST00000498254 ANKHD1Q8IWZ3 2542 aaKnown RBP1.48□□□□□ -2.17
CALD1-224ENST00000498254 CCDC168Q8NDH2 2452 aa1.48□□□□□ -2.17
CALD1-224ENST00000498254 ALPK2Q86TB3 2170 aa1.48□□□□□ -2.17
CALD1-224ENST00000498254 LRRK2Q5S007 2527 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 NOTCH1P46531 2555 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 LOC730098B7Z3J9 87 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 J3QKU1 62 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 CRIP1P50238 77 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 LINC00308Q8TCZ7 52 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 GOLGA4Q13439 2230 aaKnown RBP1.47□□□□□ -2.17
CALD1-224ENST00000498254 RANBP2P49792 3224 aaKnown RBP1.47□□□□□ -2.17
CALD1-224ENST00000498254 SPTBN4Q9H254 2564 aa1.47□□□□□ -2.17
CALD1-224ENST00000498254 M0R2N4 97 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 SMIM2Q9BVW6 85 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 STAB1Q9NY15 2570 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 SPAG17Q6Q759 2223 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 DNAH12Q6ZR08 3092 aa1.46□□□□□ -2.18
CALD1-224ENST00000498254 PCLOQ9Y6V0 5065 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 FBN1P35555 2871 aaKnown RBP1.45□□□□□ -2.18
CALD1-224ENST00000498254 UNC80Q8N2C7 3258 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 NCOR1O75376 2440 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 ZNF292O60281 2723 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 LINC00158P58513 81 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 CCL19Q99731 98 aa1.45□□□□□ -2.18
CALD1-224ENST00000498254 C2CD3Q4AC94 2353 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 TNCP24821 2201 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 G3V318 75 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 LINC01590Q5TEZ4 76 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 SMIM11BQ8TCY0 68 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 PRO3102Q9H379 93 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 UTRNP46939 3433 aa1.44□□□□□ -2.18
CALD1-224ENST00000498254 SSC5DA1L4H1 1573 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 MUC2Q02817 5179 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 NDUFA1O15239 70 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 CNFNQ9BYD5 112 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
CALD1-224ENST00000498254 DEFB131BA0A096LNP1 70 aa1.42□□□□□ -2.18
CALD1-224ENST00000498254 NCOR2Q9Y618 2525 aa1.42□□□□□ -2.18
CALD1-224ENST00000498254 NAV3Q8IVL0 2385 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 A0A096LNT2 108 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 SPTY2D1-AS1A0A0U1RR47 76 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 INE1O15225 51 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 MRPL33O75394 65 aaKnown RBP1.41□□□□□ -2.18
CALD1-224ENST00000498254 Q6ZRX8 168 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 Q8IZM0 81 aa1.41□□□□□ -2.18
CALD1-224ENST00000498254 F5P12259 2224 aa1.4□□□□□ -2.18
CALD1-224ENST00000498254 MED13LQ71F56 2210 aa1.4□□□□□ -2.18
CALD1-224ENST00000498254 RYR1P21817 5038 aa1.4□□□□□ -2.18
CALD1-224ENST00000498254 GVQW2A0A096LPI5 108 aaPredicted RBP1.4□□□□□ -2.19
CALD1-224ENST00000498254 SPINK9Q5DT21 86 aa1.4□□□□□ -2.19
CALD1-224ENST00000498254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.4□□□□□ -2.19
CALD1-224ENST00000498254 FLNCQ14315 2725 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 SPG11Q96JI7 2443 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 OTOGLQ3ZCN5 2332 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 CACNA1CQ13936 2221 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 MAP1BP46821 2468 aaKnown RBP1.39□□□□□ -2.19
CALD1-224ENST00000498254 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 LY6G6CO95867 125 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms