RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 KALRNO60229 2985 aa4□□□□□ -1.77
NEB-216ENST00000497809 C4orf3Q8WVX3 66 aa4□□□□□ -1.77
NEB-216ENST00000497809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.99□□□□□ -1.77
NEB-216ENST00000497809 COX7BP24311 80 aa3.99□□□□□ -1.77
NEB-216ENST00000497809 TRGV1A0A0A0MS02 117 aa3.98□□□□□ -1.77
NEB-216ENST00000497809 A0A1B0GU69 56 aa3.98□□□□□ -1.77
NEB-216ENST00000497809 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
NEB-216ENST00000497809 Q96NJ1 140 aa3.98□□□□□ -1.77
NEB-216ENST00000497809 SHANK1Q9Y566 2161 aa3.97□□□□□ -1.77
NEB-216ENST00000497809 NAV3Q8IVL0 2385 aa3.97□□□□□ -1.77
NEB-216ENST00000497809 GVINP1Q7Z2Y8 2422 aa3.97□□□□□ -1.77
NEB-216ENST00000497809 PIEZO2Q9H5I5 2752 aa3.96□□□□□ -1.78
NEB-216ENST00000497809 COX17Q14061 63 aa3.96□□□□□ -1.78
NEB-216ENST00000497809 SPG11Q96JI7 2443 aa3.95□□□□□ -1.78
NEB-216ENST00000497809 WDFY4Q6ZS81 3184 aa3.95□□□□□ -1.78
NEB-216ENST00000497809 POLQO75417 2590 aa3.95□□□□□ -1.78
NEB-216ENST00000497809 CRIP1P50238 77 aa3.95□□□□□ -1.78
NEB-216ENST00000497809 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
NEB-216ENST00000497809 IGKV2D-24A0A075B6R9 120 aa3.94□□□□□ -1.78
NEB-216ENST00000497809 PRB3Q04118 309 aaPredicted RBP3.94□□□□□ -1.78
NEB-216ENST00000497809 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
NEB-216ENST00000497809 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
NEB-216ENST00000497809 SPEGQ15772 3267 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 NDUFA1O15239 70 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
NEB-216ENST00000497809 SMIM11BQ8TCY0 68 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 SPTA1P02549 2419 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 A0A1W2PNN7 141 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 LINC00158P58513 81 aa3.93□□□□□ -1.78
NEB-216ENST00000497809 RPS27P42677 84 aaKnown RBP3.92□□□□□ -1.78
NEB-216ENST00000497809 C5orf56Q8N8D9 126 aa3.92□□□□□ -1.78
NEB-216ENST00000497809 BRWD1Q9NSI6 2320 aa3.92□□□□□ -1.78
NEB-216ENST00000497809 CACNA1HO95180 2353 aa3.91□□□□□ -1.78
NEB-216ENST00000497809 PCNX1Q96RV3 2341 aa3.91□□□□□ -1.78
NEB-216ENST00000497809 TENM4Q6N022 2769 aa3.91□□□□□ -1.78
NEB-216ENST00000497809 CCL22O00626 93 aa3.91□□□□□ -1.78
NEB-216ENST00000497809 SPTBN2O15020 2390 aa3.89□□□□□ -1.79
NEB-216ENST00000497809 LINC00315P59091 139 aa3.89□□□□□ -1.79
NEB-216ENST00000497809 Q6ZQY7 126 aa3.89□□□□□ -1.79
NEB-216ENST00000497809 M0R2N4 97 aa3.88□□□□□ -1.79
NEB-216ENST00000497809 C10orf55Q5SWW7 151 aa3.88□□□□□ -1.79
NEB-216ENST00000497809 CREBBPQ92793 2442 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 CADP27708 2225 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 ACYP2P14621 99 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 KRTAP13-2Q52LG2 175 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 SPINK9Q5DT21 86 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 MED13LQ71F56 2210 aa3.87□□□□□ -1.79
NEB-216ENST00000497809 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 FRYQ5TBA9 3013 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 F5P12259 2224 aa3.85□□□□□ -1.79
NEB-216ENST00000497809 COL4A2P08572 1712 aa3.84□□□□□ -1.79
NEB-216ENST00000497809 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.8
NEB-216ENST00000497809 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 DEFB131BA0A096LNP1 70 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 H3BRN7 92 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 MRPL33O75394 65 aaKnown RBP3.83□□□□□ -1.8
NEB-216ENST00000497809 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 SSBP3-AS1Q7Z2R9 100 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 SORL1Q92673 2214 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
NEB-216ENST00000497809 IGKV2-28A0A075B6P5 120 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 IGKV2D-28P01615 120 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 CCL19Q99731 98 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 CDKN2A-AS1Q9UH64 79 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 WDR87Q6ZQQ6 2873 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 TLN1Q9Y490 2541 aaKnown RBP3.82□□□□□ -1.8
NEB-216ENST00000497809 PIGYQ3MUY2 71 aa3.82□□□□□ -1.8
NEB-216ENST00000497809 J3QKU1 62 aa3.81□□□□□ -1.8
NEB-216ENST00000497809 RTTNQ86VV8 2226 aa3.81□□□□□ -1.8
NEB-216ENST00000497809 RELNP78509 3460 aa3.8□□□□□ -1.8
NEB-216ENST00000497809 CACNA1CQ13936 2221 aa3.8□□□□□ -1.8
NEB-216ENST00000497809 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
NEB-216ENST00000497809 RPL39P62891 51 aaKnown RBP3.8□□□□□ -1.8
NEB-216ENST00000497809 FN1P02751 2386 aaKnown RBP3.8□□□□□ -1.8
NEB-216ENST00000497809 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 ZZEF1O43149 2961 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 KRTAP10-9P60411 292 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 Q8IZM0 81 aa3.79□□□□□ -1.8
NEB-216ENST00000497809 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
NEB-216ENST00000497809 CDH23Q9H251 3354 aa3.78□□□□□ -1.8
NEB-216ENST00000497809 KNTC1P50748 2209 aa3.78□□□□□ -1.8
NEB-216ENST00000497809 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
NEB-216ENST00000497809 NBEAQ8NFP9 2946 aa3.77□□□□□ -1.81
NEB-216ENST00000497809 TECTAO75443 2155 aa3.77□□□□□ -1.81
NEB-216ENST00000497809 EP300Q09472 2414 aaPredicted RBP3.77□□□□□ -1.81
NEB-216ENST00000497809 FBN1P35555 2871 aaKnown RBP3.76□□□□□ -1.81
NEB-216ENST00000497809 DEFB106AQ8N104 65 aa3.76□□□□□ -1.81
NEB-216ENST00000497809 LINC00575Q6W349 94 aa3.76□□□□□ -1.81
NEB-216ENST00000497809 ITPR1Q14643 2758 aa3.76□□□□□ -1.81
NEB-216ENST00000497809 PRR9Q5T870 116 aa3.75□□□□□ -1.81
NEB-216ENST00000497809 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
NEB-216ENST00000497809 ABCA1O95477 2261 aa3.75□□□□□ -1.81
NEB-216ENST00000497809 ATRQ13535 2644 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms