RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 IGLC7A0M8Q6 106 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 M0R135 149 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 TMEM14BQ9NUH8 114 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 UQCR10Q9UDW1 63 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 COL6A6A6NMZ7 2263 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 AKAP9Q99996 3911 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 TCHHQ07283 1943 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 APCP25054 2843 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 MEGF8Q7Z7M0 2845 aa1.75□□□□□ -2.13
SNX13-211ENST00000496855 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
SNX13-211ENST00000496855 ZNF236Q9UL36 1845 aa1.74□□□□□ -2.13
SNX13-211ENST00000496855 TRBV30A0A0K0K1B3 111 aa1.74□□□□□ -2.13
SNX13-211ENST00000496855 COX6CP09669 75 aa1.74□□□□□ -2.13
SNX13-211ENST00000496855 ALKAL2Q6UX46 152 aa1.74□□□□□ -2.13
SNX13-211ENST00000496855 ARL2-SNX15V9GYD0 113 aa1.74□□□□□ -2.13
SNX13-211ENST00000496855 SPTBN1Q01082 2364 aaKnown RBP1.74□□□□□ -2.13
SNX13-211ENST00000496855 EDC4Q6P2E9 1401 aaKnown RBP1.73□□□□□ -2.13
SNX13-211ENST00000496855 PLIN4Q96Q06 1357 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 CACNA1EQ15878 2313 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 TRBV25-1A0A075B6N4 114 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 UQCRHLA0A096LP55 91 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 NCR3O14931 201 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 ZNF137PP52743 207 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 ETDBQ3ZM63 59 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 C6orf52Q5T4I8 152 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 C10orf99Q6UWK7 81 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 PPP1R1CQ8WVI7 109 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 R4GMQ9 66 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 RYR2Q92736 4967 aa1.73□□□□□ -2.13
SNX13-211ENST00000496855 AHCTF1Q8WYP5 2266 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 SORL1Q92673 2214 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 NBASA2RRP1 2371 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 CSPG4Q6UVK1 2322 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 ZANQ9Y493 2812 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 TRAV1-2A0A0B4J238 106 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 F8VRH5 84 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 LY6G6CO95867 125 aa1.72□□□□□ -2.13
SNX13-211ENST00000496855 A0A096LNT2 108 aa1.71□□□□□ -2.14
SNX13-211ENST00000496855 FAM223BA6NKX1 122 aa1.71□□□□□ -2.14
SNX13-211ENST00000496855 WFDC2Q14508 124 aa1.71□□□□□ -2.14
SNX13-211ENST00000496855 TMEM170BQ5T4T1 132 aa1.71□□□□□ -2.14
SNX13-211ENST00000496855 ACACAQ13085 2346 aa1.71□□□□□ -2.14
SNX13-211ENST00000496855 F5P12259 2224 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 LOC285095A0A1B0GVY8 99 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 M0R3E3 92 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 PLAC4Q8WY50 150 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 MGAM2Q2M2H8 2515 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 HERC2O95714 4834 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 MYO7BQ6PIF6 2116 aa1.7□□□□□ -2.14
SNX13-211ENST00000496855 UQCRHP07919 91 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 SPCS1Q9Y6A9 102 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 ANKARQ7Z5J8 1434 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 BSNQ9UPA5 3926 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 APC2O95996 2303 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 PMCHL1Q16048 86 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 NMSQ5H8A3 153 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 LINC00575Q6W349 94 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 ZNF720Q7Z2F6 126 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 BAGE3Q86Y29 109 aa1.69□□□□□ -2.14
SNX13-211ENST00000496855 NSD1Q96L73 2696 aaPredicted RBP1.69□□□□□ -2.14
SNX13-211ENST00000496855 DUOX1Q9NRD9 1551 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 CTXND1A0A1B0GTU2 59 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 LYNX1P0DP58 116 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 ACYP2P14621 99 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 BAGE2Q86Y30 109 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 S100A13Q99584 98 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 PSENENQ9NZ42 101 aa1.68□□□□□ -2.14
SNX13-211ENST00000496855 URB1O60287 2271 aaKnown RBP1.68□□□□□ -2.14
SNX13-211ENST00000496855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.143e-6■■■■□ 24.3
SNX13-211ENST00000496855 WNK1Q9H4A3 2382 aa1.67□□□□□ -2.14
SNX13-211ENST00000496855 F8WEM9 126 aa1.67□□□□□ -2.14
SNX13-211ENST00000496855 SAA2P0DJI9 122 aaPredicted RBP1.67□□□□□ -2.14
SNX13-211ENST00000496855 CFAP126Q5VTH2 177 aa1.67□□□□□ -2.14
SNX13-211ENST00000496855 ACANP16112 2415 aa1.67□□□□□ -2.14
SNX13-211ENST00000496855 VPS13CQ709C8 3753 aa1.67□□□□□ -2.14
SNX13-211ENST00000496855 GVQW2A0A096LPI5 108 aaPredicted RBP1.66□□□□□ -2.14
SNX13-211ENST00000496855 UQCR11O14957 56 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 FDCSPQ8NFU4 85 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 SPRR4Q96PI1 79 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 PRR15LQ9BU68 103 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 RABAC1Q9UI14 185 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 MYO7AQ13402 2215 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 MUC2Q02817 5179 aa1.66□□□□□ -2.14
SNX13-211ENST00000496855 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.14
SNX13-211ENST00000496855 TENM3Q9P273 2699 aa1.65□□□□□ -2.14
SNX13-211ENST00000496855 G3V318 75 aa1.65□□□□□ -2.15
SNX13-211ENST00000496855 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
SNX13-211ENST00000496855 LINC01600Q96MT4 127 aa1.65□□□□□ -2.15
SNX13-211ENST00000496855 ST20Q9HBF5 79 aa1.65□□□□□ -2.15
SNX13-211ENST00000496855 TENM2Q9NT68 2774 aa1.65□□□□□ -2.15
SNX13-211ENST00000496855 C7orf77A4D0Y5 90 aa1.64□□□□□ -2.15
SNX13-211ENST00000496855 ZNF815PA8K554 130 aa1.64□□□□□ -2.15
SNX13-211ENST00000496855 LOC730098B7Z3J9 87 aa1.64□□□□□ -2.15
SNX13-211ENST00000496855 RPL37P61927 97 aaKnown RBP1.64□□□□□ -2.15
SNX13-211ENST00000496855 HERC1Q15751 4861 aa1.64□□□□□ -2.15
SNX13-211ENST00000496855 KNTC1P50748 2209 aa1.63□□□□□ -2.15
SNX13-211ENST00000496855 BCE1O60756 84 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms