RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ASIPP42127 132 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 GNGT1P63211 74 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 PMCHL1Q16048 86 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 DEFB107AQ8IZN7 70 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 C9orf62Q8N4C0 152 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 SPTBN5Q9NRC6 3674 aaKnown RBP-0.54□□□□□ -2.5
CD46-218ENST00000496723 RNF213Q63HN8 5207 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 C5orf42Q9H799 3197 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 DNHD1Q96M86 4753 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 NCOA3Q9Y6Q9 1424 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 ACACBO00763 2458 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 DNAH8Q96JB1 4490 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 TRBV25-1A0A075B6N4 114 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 CACFD1Q9UGQ2 172 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 ABCC2Q92887 1545 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 KIAA1109Q2LD37 5005 aa-0.55□□□□□ -2.5
CD46-218ENST00000496723 SUPT6HQ7KZ85 1726 aaKnown RBP-0.55□□□□□ -2.5
CD46-218ENST00000496723 USP9XQ93008 2570 aaPredicted RBP-0.55□□□□□ -2.5
CD46-218ENST00000496723 TROQ12816 1431 aaPredicted RBP-0.55□□□□□ -2.5
CD46-218ENST00000496723 RYR3Q15413 4870 aa-0.56□□□□□ -2.5
CD46-218ENST00000496723 CICQ96RK0 1608 aaPredicted RBP-0.56□□□□□ -2.5
CD46-218ENST00000496723 PLECQ15149 4684 aaKnown RBP-0.56□□□□□ -2.5
CD46-218ENST00000496723 GNGT2O14610 69 aa-0.56□□□□□ -2.5
CD46-218ENST00000496723 MRPL34Q9BQ48 92 aaKnown RBP-0.56□□□□□ -2.5
CD46-218ENST00000496723 FRYQ5TBA9 3013 aa-0.56□□□□□ -2.5
CD46-218ENST00000496723 TIAM2Q8IVF5 1701 aa-0.56□□□□□ -2.5
CD46-218ENST00000496723 CLTCQ00610 1675 aaKnown RBP-0.56□□□□□ -2.5
CD46-218ENST00000496723 TLN2Q9Y4G6 2542 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 PRDM15P57071 1507 aaPredicted RBP-0.57□□□□□ -2.5
CD46-218ENST00000496723 MT1AP04731 61 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 UQCRHP07919 91 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 WFDC13Q8IUB5 93 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 PREX1Q8TCU6 1659 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 LAMA2P24043 3122 aaKnown RBP-0.57□□□□□ -2.5
CD46-218ENST00000496723 RYR2Q92736 4967 aa-0.57□□□□□ -2.5
CD46-218ENST00000496723 POLR1AO95602 1720 aaPredicted RBP-0.58□□□□□ -2.5
CD46-218ENST00000496723 RANBP2P49792 3224 aaKnown RBP-0.58□□□□□ -2.5
CD46-218ENST00000496723 NRXN1Q9ULB1 1477 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 RAPGEF2Q9Y4G8 1499 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 MPC2O95563 127 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 HEPN1Q6WQI6 88 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 SRCAPQ6ZRS2 3230 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 LTN1O94822 1766 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 LAMA3Q16787 3333 aa-0.58□□□□□ -2.5
CD46-218ENST00000496723 BPTFQ12830 3046 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
CD46-218ENST00000496723 CCL22O00626 93 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 ARMS2P0C7Q2 107 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 AP4S1Q9Y587 144 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 SAMD9Q5K651 1589 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 DOT1LQ8TEK3 1739 aa-0.59□□□□□ -2.5
CD46-218ENST00000496723 AKAP12Q02952 1782 aa-0.6□□□□□ -2.5
CD46-218ENST00000496723 ALKQ9UM73 1620 aa-0.6□□□□□ -2.5
CD46-218ENST00000496723 FYCO1Q9BQS8 1478 aa-0.6□□□□□ -2.5
CD46-218ENST00000496723 PEG3Q9GZU2 1588 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 TRAV30A0A087WSZ9 112 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 H7BZZ5 65 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 PMCHL2Q9BQD1 86 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 ZNF831Q5JPB2 1677 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 RGPD8O14715 1765 aaPredicted RBP-0.6□□□□□ -2.51
CD46-218ENST00000496723 RGPD5Q99666 1765 aa-0.6□□□□□ -2.51
CD46-218ENST00000496723 TRRAPQ9Y4A5 3859 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 ANKRD26Q9UPS8 1709 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 TRIOO75962 3097 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 TRBV7-7A0A0K0K1E9 115 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 TMEM218A2RU14 115 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 H3BNG1 76 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 ATOX1O00244 68 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 IGLC2P0DOY2 106 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 IGLC3P0DOY3 106 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 TRGV9Q99603 122 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 HIGD1BQ9P298 99 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 CDKN2A-AS1Q9UH64 79 aa-0.61□□□□□ -2.51
CD46-218ENST00000496723 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.61□□□□□ -2.51
CD46-218ENST00000496723 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 CEP295Q9C0D2 2601 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 COL12A1Q99715 3063 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 NESP48681 1621 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 SPTY2D1-AS1A0A0U1RR47 76 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 H0YGG7 62 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 MT-ATP8P03928 68 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 S100PP25815 95 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 PSENENQ9NZ42 101 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 LRBAP50851 2863 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 ANKRD36BQ8N2N9 1353 aa-0.62□□□□□ -2.51
CD46-218ENST00000496723 DYNC1H1Q14204 4646 aaKnown RBP-0.63□□□□□ -2.51
CD46-218ENST00000496723 CLIP1P30622 1438 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 NDUFA3O95167 84 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 SERP2Q8N6R1 65 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 TCEAL7Q9BRU2 100 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 MAGI2Q86UL8 1455 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 CHD7Q9P2D1 2997 aa-0.63□□□□□ -2.51
CD46-218ENST00000496723 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 SPTAN1Q13813 2472 aaKnown RBP-0.64□□□□□ -2.51
CD46-218ENST00000496723 ANKRD36CQ5JPF3 1778 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 F8WEM9 126 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 S100A10P60903 97 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 MYO9AB2RTY4 2548 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 TMEM131LA2VDJ0 1609 aa-0.64□□□□□ -2.51
CD46-218ENST00000496723 LRRC7Q96NW7 1537 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms