RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 IFITM1P13164 125 aa6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 BVES-AS1Q5T3Y7 98 aa6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
CLCNKA-206ENST00000491433 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
CLCNKA-206ENST00000491433 CEND1Q8N111 149 aa6.48□□□□□ -1.37
CLCNKA-206ENST00000491433 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
CLCNKA-206ENST00000491433 BCE1O60756 84 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 FAM229BQ4G0N7 80 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 SOSTDC1Q6X4U4 206 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 SNHG12Q9BXW3 62 aa6.47□□□□□ -1.37
CLCNKA-206ENST00000491433 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
CLCNKA-206ENST00000491433 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
CLCNKA-206ENST00000491433 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
CLCNKA-206ENST00000491433 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
CLCNKA-206ENST00000491433 M0R143 59 aa6.45□□□□□ -1.38
CLCNKA-206ENST00000491433 FXYD2P54710 66 aa6.45□□□□□ -1.38
CLCNKA-206ENST00000491433 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
CLCNKA-206ENST00000491433 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 PFN2P35080 140 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 HINT1P49773 126 aaPredicted RBP6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 LINC00158P58513 81 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 DAND5Q8N907 189 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
CLCNKA-206ENST00000491433 NDUFC2O95298 119 aa6.43□□□□□ -1.38
CLCNKA-206ENST00000491433 CFC1BP0CG36 223 aa6.43□□□□□ -1.38
CLCNKA-206ENST00000491433 KRTAP13-2Q52LG2 175 aa6.43□□□□□ -1.38
CLCNKA-206ENST00000491433 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
CLCNKA-206ENST00000491433 A0A0U1RRA0 63 aa6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 A4D1N5 150 aa6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 UBE2AP49459 152 aa6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 FP248Q71RG6 208 aaPredicted RBP6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
CLCNKA-206ENST00000491433 CFC1P0CG37 223 aa6.41□□□□□ -1.38
CLCNKA-206ENST00000491433 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
CLCNKA-206ENST00000491433 Q8NDZ9 215 aa6.41□□□□□ -1.38
CLCNKA-206ENST00000491433 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 SPAG11AQ6PDA7 123 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 XAGE1AQ9HD64 81 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 ANAPC11Q9NYG5 84 aa6.4□□□□□ -1.38
CLCNKA-206ENST00000491433 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
CLCNKA-206ENST00000491433 A6NJY4 79 aa6.39□□□□□ -1.39
CLCNKA-206ENST00000491433 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
CLCNKA-206ENST00000491433 IGLV5-37A0A075B6J1 123 aa6.38□□□□□ -1.39
CLCNKA-206ENST00000491433 A6NDN8 102 aa6.38□□□□□ -1.39
CLCNKA-206ENST00000491433 NPC2P61916 151 aa6.38□□□□□ -1.39
CLCNKA-206ENST00000491433 LINC00167Q96N53 147 aa6.38□□□□□ -1.39
CLCNKA-206ENST00000491433 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
CLCNKA-206ENST00000491433 TAX1BP3O14907 124 aa6.37□□□□□ -1.39
CLCNKA-206ENST00000491433 VPREB1P12018 145 aa6.37□□□□□ -1.39
CLCNKA-206ENST00000491433 NHP2Q9NX24 153 aaKnown RBP6.37□□□□□ -1.39
CLCNKA-206ENST00000491433 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 COL5A1-AS1Q5SY13 56 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
CLCNKA-206ENST00000491433 BATFQ16520 125 aa6.34□□□□□ -1.39
CLCNKA-206ENST00000491433 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.39
CLCNKA-206ENST00000491433 TRAV13-2A0A0B4J235 113 aa6.33□□□□□ -1.4
CLCNKA-206ENST00000491433 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
CLCNKA-206ENST00000491433 K7ERJ3 54 aa6.33□□□□□ -1.4
CLCNKA-206ENST00000491433 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
CLCNKA-206ENST00000491433 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
CLCNKA-206ENST00000491433 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
CLCNKA-206ENST00000491433 C9orf118A6NHY6 69 aa6.32□□□□□ -1.4
CLCNKA-206ENST00000491433 M0R378 163 aa6.32□□□□□ -1.4
CLCNKA-206ENST00000491433 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
CLCNKA-206ENST00000491433 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
CLCNKA-206ENST00000491433 TMEM126AQ9H061 195 aa6.31□□□□□ -1.4
CLCNKA-206ENST00000491433 USH2AO75445 5202 aa6.31□□□□□ -1.4
CLCNKA-206ENST00000491433 FAM19A1Q7Z5A9 133 aa6.3□□□□□ -1.4
CLCNKA-206ENST00000491433 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
CLCNKA-206ENST00000491433 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
CLCNKA-206ENST00000491433 SPINK1P00995 79 aa6.28□□□□□ -1.4
CLCNKA-206ENST00000491433 PRLHP81277 87 aa6.28□□□□□ -1.4
CLCNKA-206ENST00000491433 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
CLCNKA-206ENST00000491433 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 NCR3O14931 201 aa6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 SPRR1AP35321 89 aa6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 KCNQ1DNQ9H478 68 aa6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
CLCNKA-206ENST00000491433 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
CLCNKA-206ENST00000491433 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
CLCNKA-206ENST00000491433 H3BUT2 72 aa6.26□□□□□ -1.41
CLCNKA-206ENST00000491433 TRBV7-6A0A0J9YX20 115 aa6.25□□□□□ -1.41
CLCNKA-206ENST00000491433 TRIAP1O43715 76 aa6.25□□□□□ -1.41
CLCNKA-206ENST00000491433 MT1HP80294 61 aa6.24□□□□□ -1.41
CLCNKA-206ENST00000491433 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
CLCNKA-206ENST00000491433 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms