RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 BPY2O14599 106 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 TLX1NBP0CAT3 122 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 FAM236CP0DP71 79 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 SPAG11BQ08648 103 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 WFDC11Q8NEX6 87 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 CAMK2N2Q96S95 79 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 KCNQ1DNQ9H478 68 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 DHRS4-AS1Q9P1J3 65 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 GVINP1Q7Z2Y8 2422 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 SPG11Q96JI7 2443 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 MXRA5Q9NR99 2828 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 CELSR2Q9HCU4 2923 aa1.32□□□□□ -2.2
SNRNP40-207ENST00000491106 KMT2BQ9UMN6 2715 aaPredicted RBP1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 ANKRD17O75179 2603 aaKnown RBP1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 F8WEM9 126 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 NDUFB1O75438 58 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 FUSP35637 526 aaKnown RBP eCLIP1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 SYCNQ0VAF6 134 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 ESRGQ1W209 222 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 KPRPQ5T749 579 aaPredicted RBP1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 Q5XG85 94 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 KRTAP26-1Q6PEX3 210 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 Q8NAQ8 132 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 RMI2Q96E14 147 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 SPRR4Q96PI1 79 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 TM2D3Q9BRN9 247 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 OCR1Q9BZK8 76 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 CYSTM1Q9H1C7 97 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 WFDC10AQ9H1F0 79 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 XAGE1AQ9HD64 81 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 C6orf48Q9UBA6 75 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 PRO0628Q9UI54 55 aa1.31□□□□□ -2.2
SNRNP40-207ENST00000491106 COL12A1Q99715 3063 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 ITPR1Q14643 2758 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 IGLV1-50A0A075B6I6 118 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 A0A0U1RQV1 116 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 LCE6AA0A183 80 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 H3BPC8 53 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 J3QKU1 62 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 M0R2N4 97 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 DEFB4AO15263 64 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 PRB1P04280 392 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 SPRR1AP35321 89 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 DEFB135Q30KP9 77 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 LINC01556Q5JQF7 62 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 NKAPP1Q8N9T2 125 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 Q8NDZ9 215 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 V9GYY9 64 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 MAP1AP78559 2803 aaPredicted RBP1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 BSNQ9UPA5 3926 aa1.3□□□□□ -2.2
SNRNP40-207ENST00000491106 ZFHX3Q15911 3703 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 MUC6Q6W4X9 2439 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 SPENQ96T58 3664 aaKnown RBP1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 IGKV2D-24A0A075B6R9 120 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 ETDCA0A1B0GVM5 59 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 A0A1W2PNM2 257 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 KRTAP4-16G5E9R7 235 aaPredicted RBP1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 OXTP01178 125 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 IGKV4-1P06312 121 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 KRTAP1-4P0C5Y4 121 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 HTN3P15516 51 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 MP68P56378 58 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 Q1T7F1 81 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 C1orf137Q5JT78 98 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 HRCT1Q6UXD1 115 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 Q6ZRU5 148 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 LINC00336Q6ZUF6 198 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 CYP4F30PQ9H0H9 118 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 NOTCH2Q04721 2471 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 TTC28Q96AY4 2481 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 ASPMQ8IZT6 3477 aa1.29□□□□□ -2.2
SNRNP40-207ENST00000491106 MUC3AQ02505 3323 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 FBN2P35556 2912 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 IGLV8-61A0A075B6I0 122 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 DEFB131BA0A096LNP1 70 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 HCG22E2RYF7 251 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 Q6ZRX8 168 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 WFDC10BQ8IUB3 73 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 C15orf56Q8N910 161 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 C7orf33Q8WU49 177 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 LIMD2Q9BT23 127 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 HIGD2AQ9BW72 106 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 HIVEP2P31629 2446 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 USP9XQ93008 2570 aaPredicted RBP1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 APCP25054 2843 aa1.28□□□□□ -2.2
SNRNP40-207ENST00000491106 LAMA5O15230 3695 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 SPTBN4Q9H254 2564 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 NCOR2Q9Y618 2525 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 C2CD3Q4AC94 2353 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 FAM168BA1KXE4 195 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms