RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 RIF1Q5UIP0 2472 aaKnown RBP-1.05□□□□□ -2.58
SEMA3A-207ENST00000490883 PKD1L2Q7Z442 2459 aa-1.05□□□□□ -2.58
SEMA3A-207ENST00000490883 NRXN1Q9ULB1 1477 aa-1.05□□□□□ -2.58
SEMA3A-207ENST00000490883 COL12A1Q99715 3063 aa-1.05□□□□□ -2.58
SEMA3A-207ENST00000490883 RAPGEF2Q9Y4G8 1499 aa-1.05□□□□□ -2.58
SEMA3A-207ENST00000490883 MTORP42345 2549 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 MON2Q7Z3U7 1717 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 CSMD1Q96PZ7 3565 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 PTPN23Q9H3S7 1636 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 S100A10P60903 97 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 DEFB112Q30KQ8 113 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 ADAMTS12P58397 1594 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 ABCC2Q92887 1545 aa-1.06□□□□□ -2.58
SEMA3A-207ENST00000490883 ZZEF1O43149 2961 aa-1.07□□□□□ -2.58
SEMA3A-207ENST00000490883 DNAH8Q96JB1 4490 aa-1.07□□□□□ -2.58
SEMA3A-207ENST00000490883 CCL22O00626 93 aa-1.07□□□□□ -2.58
SEMA3A-207ENST00000490883 AP4S1Q9Y587 144 aa-1.07□□□□□ -2.58
SEMA3A-207ENST00000490883 FAM186AA6NE01 2351 aa-1.07□□□□□ -2.58
SEMA3A-207ENST00000490883 SAMD9Q5K651 1589 aa-1.08□□□□□ -2.58
SEMA3A-207ENST00000490883 TRBV7-7A0A0K0K1E9 115 aa-1.08□□□□□ -2.58
SEMA3A-207ENST00000490883 HMGN3Q15651 99 aa-1.08□□□□□ -2.58
SEMA3A-207ENST00000490883 TCEAL7Q9BRU2 100 aa-1.08□□□□□ -2.58
SEMA3A-207ENST00000490883 LELP1Q5T871 98 aa-1.09□□□□□ -2.58
SEMA3A-207ENST00000490883 ALKAL2Q6UX46 152 aa-1.09□□□□□ -2.58
SEMA3A-207ENST00000490883 COL14A1Q05707 1796 aaKnown RBP-1.09□□□□□ -2.58
SEMA3A-207ENST00000490883 CEP290O15078 2479 aa-1.09□□□□□ -2.58
SEMA3A-207ENST00000490883 C5P01031 1676 aa-1.1□□□□□ -2.58
SEMA3A-207ENST00000490883 SPTY2D1-AS1A0A0U1RR47 76 aa-1.1□□□□□ -2.59
SEMA3A-207ENST00000490883 PSENENQ9NZ42 101 aa-1.1□□□□□ -2.59
SEMA3A-207ENST00000490883 CLIP1P30622 1438 aa-1.1□□□□□ -2.59
SEMA3A-207ENST00000490883 CUX1P39880 1505 aa-1.1□□□□□ -2.59
SEMA3A-207ENST00000490883 KIF20BQ96Q89 1820 aa-1.1□□□□□ -2.59
SEMA3A-207ENST00000490883 TEX14Q8IWB6 1497 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 ITPR1Q14643 2758 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 CEP295Q9C0D2 2601 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 ATP6V1G2-DDX39BF2Z307 99 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 LINC00032P0C843 101 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 DEFA5Q01523 94 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 CDKN2A-AS1Q9UH64 79 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 FRYQ5TBA9 3013 aa-1.11□□□□□ -2.59
SEMA3A-207ENST00000490883 TRANK1O15050 2925 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 COL6A5A8TX70 2615 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 TROQ12816 1431 aaPredicted RBP-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 A0A0C4DFX4 3053 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 RBP2P50120 134 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 HEPN1Q6WQI6 88 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 UTP20O75691 2785 aaKnown RBP-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 DMXL1Q9Y485 3027 aa-1.12□□□□□ -2.59
SEMA3A-207ENST00000490883 DNAH17Q9UFH2 4485 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 IGLC2P0DOY2 106 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 IGLC3P0DOY3 106 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 ETDBQ3ZM63 59 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 ACBD7Q8N6N7 88 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 DPY30Q9C005 99 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 HIGD1BQ9P298 99 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 FYCO1Q9BQS8 1478 aa-1.13□□□□□ -2.59
SEMA3A-207ENST00000490883 DNAH5Q8TE73 4624 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 SMG1Q96Q15 3661 aaKnown RBP-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 D6R8Y8 96 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 MT1XP80297 61 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 COL5A1-AS1Q5SY13 56 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 MUSTN1Q8IVN3 82 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 NBEAL2Q6ZNJ1 2754 aa-1.14□□□□□ -2.59
SEMA3A-207ENST00000490883 MYH4Q9Y623 1939 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 NBEAQ8NFP9 2946 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 TRIOO75962 3097 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 GCN1Q92616 2671 aaKnown RBP-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 F8WEM9 126 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 LEPROTL1O95214 131 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 ZNF720Q7Z2F6 126 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 WFDC13Q8IUB5 93 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 KALRNO60229 2985 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 CHD7Q9P2D1 2997 aa-1.15□□□□□ -2.59
SEMA3A-207ENST00000490883 BCORQ6W2J9 1755 aa-1.16□□□□□ -2.59
SEMA3A-207ENST00000490883 C5orf42Q9H799 3197 aa-1.16□□□□□ -2.59
SEMA3A-207ENST00000490883 UQCRHLA0A096LP55 91 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 C9orf92A6NGG3 77 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 MT1HL1P0DM35 61 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 FAUP35544 74 aaKnown RBP-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 KRTAP19-5Q3LI72 72 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 CRYBG1Q9Y4K1 1723 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 CNTLNQ9NXG0 1405 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 ACACBO00763 2458 aa-1.16□□□□□ -2.6
SEMA3A-207ENST00000490883 PDE4DIPQ5VU43 2346 aa-1.17□□□□□ -2.6
SEMA3A-207ENST00000490883 RANBP2P49792 3224 aaKnown RBP-1.17□□□□□ -2.6
SEMA3A-207ENST00000490883 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.18□□□□□ -2.6
SEMA3A-207ENST00000490883 MYO9AB2RTY4 2548 aa-1.18□□□□□ -2.6
SEMA3A-207ENST00000490883 EYSQ5T1H1 3165 aa-1.18□□□□□ -2.6
SEMA3A-207ENST00000490883 DNAH10Q8IVF4 4471 aa-1.19□□□□□ -2.6
SEMA3A-207ENST00000490883 H0YAA0 97 aa-1.19□□□□□ -2.6
SEMA3A-207ENST00000490883 TRRAPQ9Y4A5 3859 aa-1.19□□□□□ -2.6
SEMA3A-207ENST00000490883 UBR3Q6ZT12 1888 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 CFAP46Q8IYW2 2715 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 RGPD2P0DJD1 1756 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 H3BNG1 76 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 NCMAPQ5T1S8 102 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 UBE2D4Q9Y2X8 147 aa-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 SPENQ96T58 3664 aaKnown RBP-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 CICQ96RK0 1608 aaPredicted RBP-1.2□□□□□ -2.6
SEMA3A-207ENST00000490883 TLN2Q9Y4G6 2542 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms