RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RGPD5Q99666 1765 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 A0A1B0GUT8 65 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 IQCF6A8MYZ5 107 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 CCL22O00626 93 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 MRPL34Q9BQ48 92 aaKnown RBP0.05□□□□□ -2.4
CD46-215ENST00000488596 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 NBASA2RRP1 2371 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 CREBBPQ92793 2442 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
CD46-215ENST00000488596 LYSTQ99698 3801 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 DIP2BQ9P265 1576 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 MYMXA0A1B0GTQ4 84 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 SPRR2DP22532 72 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 COX7BP24311 80 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 SNRPFP62306 86 aaKnown RBP0.04□□□□□ -2.4
CD46-215ENST00000488596 H1FX-AS1Q4G0G2 97 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 PIK3C2BO00750 1634 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 ZNF831Q5JPB2 1677 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 C4AP0C0L4 1744 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 C4BP0C0L5 1744 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 DOT1LQ8TEK3 1739 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 AKAP13Q12802 2813 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 CLIP1P30622 1438 aa0.04□□□□□ -2.4
CD46-215ENST00000488596 STAB2Q8WWQ8 2551 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 MED14O60244 1454 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 CCDC18Q5T9S5 1454 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
CD46-215ENST00000488596 HECTD1Q9ULT8 2610 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 NESP48681 1621 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 USP32Q8NFA0 1604 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 PRRC2CQ9Y520 2896 aaKnown RBP0.03□□□□□ -2.4
CD46-215ENST00000488596 RPL38P63173 70 aaKnown RBP0.03□□□□□ -2.4
CD46-215ENST00000488596 HEPN1Q6WQI6 88 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 LINC00643Q86TS7 51 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 GAFA1Q96PS6 74 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 RABAC1Q9UI14 185 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 SETD2Q9BYW2 2564 aaPredicted RBP0.03□□□□□ -2.4
CD46-215ENST00000488596 SCN11AQ9UI33 1791 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 ARFGEF2Q9Y6D5 1785 aa0.03□□□□□ -2.4
CD46-215ENST00000488596 URB2Q14146 1524 aaKnown RBP0.03□□□□□ -2.41
CD46-215ENST00000488596 MAGI3Q5TCQ9 1506 aa0.03□□□□□ -2.41
CD46-215ENST00000488596 DCAF1Q9Y4B6 1507 aa0.03□□□□□ -2.41
CD46-215ENST00000488596 CEP170BQ9Y4F5 1589 aaPredicted RBP0.02□□□□□ -2.41
CD46-215ENST00000488596 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 CEBPZOSA8MTT3 80 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 M0R2T5 61 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 NBEAL1Q6ZS30 2694 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 PCNX1Q96RV3 2341 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 NWD1Q149M9 1564 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 VPS13BQ7Z7G8 4022 aa0.02□□□□□ -2.41
CD46-215ENST00000488596 STAB1Q9NY15 2570 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 ZZEF1O43149 2961 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 DNAH6Q9C0G6 4158 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 TRAV21A0A0B4J279 112 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 KANTRA0A1W2PQU2 76 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 ACYP1P07311 99 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 TDRG1Q3Y452 100 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 LELP1Q5T871 98 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 WFDC9Q8NEX5 89 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 MUC2Q02817 5179 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 TGP01266 2768 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 DNAH3Q8TD57 4116 aa0.01□□□□□ -2.41
CD46-215ENST00000488596 TNRC18O15417 2968 aaPredicted RBP0□□□□□ -2.41
CD46-215ENST00000488596 SCRIBQ14160 1630 aa0□□□□□ -2.41
CD46-215ENST00000488596 NCOA2Q15596 1464 aa0□□□□□ -2.41
CD46-215ENST00000488596 PLCH1Q4KWH8 1693 aa0□□□□□ -2.41
CD46-215ENST00000488596 DDX60LQ5H9U9 1706 aaKnown RBP0□□□□□ -2.41
CD46-215ENST00000488596 WFDC13Q8IUB5 93 aa0□□□□□ -2.41
CD46-215ENST00000488596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0□□□□□ -2.41
CD46-215ENST00000488596 KDM5DQ9BY66 1539 aa0□□□□□ -2.41
CD46-215ENST00000488596 CDKN2A-AS1Q9UH64 79 aa0□□□□□ -2.41
CD46-215ENST00000488596 DSPP15924 2871 aaKnown RBP-0□□□□□ -2.41
CD46-215ENST00000488596 PDZD2O15018 2839 aa-0□□□□□ -2.41
CD46-215ENST00000488596 NF1P21359 2839 aa-0□□□□□ -2.41
CD46-215ENST00000488596 ADAMTS12P58397 1594 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 CFAP74Q9C0B2 1584 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 ERVK-7P63135 1459 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 ARHGAP35Q9NRY4 1499 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 EPG5Q9HCE0 2579 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 NDUFB1O75438 58 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 DEFB135Q30KP9 77 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 S100A13Q99584 98 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 BPTFQ12830 3046 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 RICTORQ6R327 1708 aa-0.01□□□□□ -2.41
CD46-215ENST00000488596 SPG11Q96JI7 2443 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 HTTP42858 3142 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 CCDC88BA6NC98 1476 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 ADIRFQ15847 76 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 ATP5EP2Q5VTU8 51 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 COX6B2Q6YFQ2 88 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 ST20Q9HBF5 79 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 CICQ96RK0 1608 aaPredicted RBP-0.02□□□□□ -2.41
CD46-215ENST00000488596 PKHD1L1Q86WI1 4243 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 SPTBN4Q9H254 2564 aa-0.02□□□□□ -2.41
CD46-215ENST00000488596 ABCC1P33527 1531 aa-0.03□□□□□ -2.41
CD46-215ENST00000488596 SRRM2Q9UQ35 2752 aaKnown RBP-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms