RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 TIAM2Q8IVF5 1701 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 PREX1Q8TCU6 1659 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 H3BUT2 72 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 COX8AP10176 69 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 S100A13Q99584 98 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 CCDC141Q6ZP82 1450 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 FLNCQ14315 2725 aa0.21□□□□□ -2.38
RAD50-207ENST00000487596 CFAP74Q9C0B2 1584 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 SPTY2D1-AS1A0A0U1RR47 76 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 KANTRA0A1W2PQU2 76 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 I3L3M4 83 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 ADIRFQ15847 76 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 DEFB121Q5J5C9 76 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 GAFA1Q96PS6 74 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
RAD50-207ENST00000487596 HSPG2P98160 4391 aa0.2□□□□□ -2.38
RAD50-207ENST00000487596 RGPD8O14715 1765 aaPredicted RBP0.19□□□□□ -2.38
RAD50-207ENST00000487596 RGPD5Q99666 1765 aa0.19□□□□□ -2.38
RAD50-207ENST00000487596 FXYD6Q9H0Q3 95 aa0.19□□□□□ -2.38
RAD50-207ENST00000487596 ABCA8O94911 1581 aa0.19□□□□□ -2.38
RAD50-207ENST00000487596 URB2Q14146 1524 aaKnown RBP0.18□□□□□ -2.38
RAD50-207ENST00000487596 MAGI3Q5TCQ9 1506 aa0.18□□□□□ -2.38
RAD50-207ENST00000487596 AKAP13Q12802 2813 aa0.17□□□□□ -2.38
RAD50-207ENST00000487596 IFI6P09912 130 aa0.17□□□□□ -2.38
RAD50-207ENST00000487596 RRBP1Q9P2E9 1410 aaKnown RBP0.17□□□□□ -2.38
RAD50-207ENST00000487596 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
RAD50-207ENST00000487596 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
RAD50-207ENST00000487596 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
RAD50-207ENST00000487596 WFDC9Q8NEX5 89 aa0.16□□□□□ -2.38
RAD50-207ENST00000487596 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
RAD50-207ENST00000487596 TNRC6CQ9HCJ0 1690 aaKnown RBP0.15□□□□□ -2.39
RAD50-207ENST00000487596 MAP3K1Q13233 1512 aa0.15□□□□□ -2.39
RAD50-207ENST00000487596 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.39
RAD50-207ENST00000487596 C4AP0C0L4 1744 aa0.15□□□□□ -2.39
RAD50-207ENST00000487596 C4BP0C0L5 1744 aa0.15□□□□□ -2.39
RAD50-207ENST00000487596 LYSTQ99698 3801 aa0.15□□□□□ -2.39
RAD50-207ENST00000487596 PRRC2CQ9Y520 2896 aaKnown RBP0.15□□□□□ -2.39
RAD50-207ENST00000487596 CFAP43Q8NDM7 1665 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 APC2O95996 2303 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 NESP48681 1621 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 IQGAP3Q86VI3 1631 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 MYO5CQ9NQX4 1742 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 CD163L1Q9NR16 1453 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 NWD1Q149M9 1564 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 PLCH1Q4KWH8 1693 aa0.14□□□□□ -2.39
RAD50-207ENST00000487596 CLIP1P30622 1438 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 ABCC1P33527 1531 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 PTPN23Q9H3S7 1636 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 RICTORQ6R327 1708 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 PDE4DIPQ5VU43 2346 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 HMGA1P17096 107 aaKnown RBP0.13□□□□□ -2.39
RAD50-207ENST00000487596 C18orf32Q8TCD1 76 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 PKD1P98161 4303 aa0.13□□□□□ -2.39
RAD50-207ENST00000487596 LRP2P98164 4655 aa0.12□□□□□ -2.39
RAD50-207ENST00000487596 LCE6AA0A183 80 aa0.12□□□□□ -2.39
RAD50-207ENST00000487596 SPINK4O60575 86 aa0.12□□□□□ -2.39
RAD50-207ENST00000487596 PARP4Q9UKK3 1724 aaKnown RBP0.11□□□□□ -2.39
RAD50-207ENST00000487596 NDUFA3O95167 84 aa0.11□□□□□ -2.39
RAD50-207ENST00000487596 SMIM13P0DJ93 91 aa0.11□□□□□ -2.39
RAD50-207ENST00000487596 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
RAD50-207ENST00000487596 CCL22O00626 93 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 SPRR2DP22532 72 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 HEPN1Q6WQI6 88 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 WFDC13Q8IUB5 93 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 ACANP16112 2415 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 NBASA2RRP1 2371 aa0.1□□□□□ -2.39
RAD50-207ENST00000487596 LRP1BQ9NZR2 4599 aa0.09□□□□□ -2.39
RAD50-207ENST00000487596 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
RAD50-207ENST00000487596 COL6A3P12111 3177 aa0.09□□□□□ -2.39
RAD50-207ENST00000487596 FLNBO75369 2602 aaKnown RBP0.09□□□□□ -2.39
RAD50-207ENST00000487596 HECTD1Q9ULT8 2610 aa0.09□□□□□ -2.4
RAD50-207ENST00000487596 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.4
RAD50-207ENST00000487596 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 TJP1Q07157 1748 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 ANKARQ7Z5J8 1434 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 UMAD1C9J7I0 102 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 NDUFB1O75438 58 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 NREPQ16612 68 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 ATP5EP2Q5VTU8 51 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 BPTFQ12830 3046 aa0.08□□□□□ -2.4
RAD50-207ENST00000487596 ADAMTS12P58397 1594 aa0.07□□□□□ -2.4
RAD50-207ENST00000487596 EIF2AK4Q9P2K8 1649 aaKnown RBP0.07□□□□□ -2.4
RAD50-207ENST00000487596 CDKN2A-AS1Q9UH64 79 aa0.07□□□□□ -2.4
RAD50-207ENST00000487596 FSIP2Q5CZC0 6907 aa0.07□□□□□ -2.4
RAD50-207ENST00000487596 ITSN1Q15811 1721 aa0.07□□□□□ -2.4
RAD50-207ENST00000487596 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
RAD50-207ENST00000487596 CCDC88BA6NC98 1476 aa0.06□□□□□ -2.4
RAD50-207ENST00000487596 IFI27P40305 119 aaPredicted RBP0.06□□□□□ -2.4
RAD50-207ENST00000487596 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
RAD50-207ENST00000487596 WIZO95785 1651 aa0.05□□□□□ -2.4
RAD50-207ENST00000487596 A0A087WXM4 84 aa0.05□□□□□ -2.4
RAD50-207ENST00000487596 ZZEF1O43149 2961 aa0.04□□□□□ -2.4
RAD50-207ENST00000487596 UGGT2Q9NYU1 1516 aa0.04□□□□□ -2.4
RAD50-207ENST00000487596 RPL38P63173 70 aaKnown RBP0.04□□□□□ -2.4
RAD50-207ENST00000487596 NRAPQ86VF7 1730 aa0.04□□□□□ -2.4
RAD50-207ENST00000487596 LOC730098B7Z3J9 87 aa0.03□□□□□ -2.4
RAD50-207ENST00000487596 M0R2T5 61 aa0.03□□□□□ -2.4
RAD50-207ENST00000487596 NDUFA4O00483 81 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms