RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
HOXA9-204ENST00000487384 TMEM170BQ5T4T1 132 aa4.54□□□□□ -1.68
HOXA9-204ENST00000487384 FA2HQ7L5A8 372 aa4.54□□□□□ -1.68
HOXA9-204ENST00000487384 SMCO4Q9NRQ5 59 aa4.54□□□□□ -1.68
HOXA9-204ENST00000487384 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
HOXA9-204ENST00000487384 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
HOXA9-204ENST00000487384 HERV-K104P63124 156 aa4.52□□□□□ -1.69
HOXA9-204ENST00000487384 SFTA2Q6UW10 78 aa4.52□□□□□ -1.69
HOXA9-204ENST00000487384 HRCT1Q6UXD1 115 aa4.52□□□□□ -1.69
HOXA9-204ENST00000487384 Q9BRP9 147 aa4.52□□□□□ -1.69
HOXA9-204ENST00000487384 A0A096LNJ9 63 aa4.51□□□□□ -1.69
HOXA9-204ENST00000487384 MEIG1Q5JSS6 88 aa4.51□□□□□ -1.69
HOXA9-204ENST00000487384 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
HOXA9-204ENST00000487384 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
HOXA9-204ENST00000487384 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
HOXA9-204ENST00000487384 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
HOXA9-204ENST00000487384 AKR1D1P51857 326 aa4.5□□□□□ -1.69
HOXA9-204ENST00000487384 PMCHL1Q16048 86 aa4.5□□□□□ -1.69
HOXA9-204ENST00000487384 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
HOXA9-204ENST00000487384 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
HOXA9-204ENST00000487384 Q6ZRX8 168 aa4.49□□□□□ -1.69
HOXA9-204ENST00000487384 ST20-AS1Q8NBB2 130 aa4.49□□□□□ -1.69
HOXA9-204ENST00000487384 TSTD3H0UI37 97 aa4.48□□□□□ -1.69
HOXA9-204ENST00000487384 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
HOXA9-204ENST00000487384 DDTP30046 118 aa4.48□□□□□ -1.69
HOXA9-204ENST00000487384 FABP9Q0Z7S8 132 aa4.48□□□□□ -1.69
HOXA9-204ENST00000487384 TMEM223A0PJW6 202 aa4.47□□□□□ -1.69
HOXA9-204ENST00000487384 HBDP02042 147 aa4.47□□□□□ -1.69
HOXA9-204ENST00000487384 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
HOXA9-204ENST00000487384 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
HOXA9-204ENST00000487384 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
HOXA9-204ENST00000487384 DLEU1O43261 78 aa4.45□□□□□ -1.7
HOXA9-204ENST00000487384 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
HOXA9-204ENST00000487384 USH2AO75445 5202 aa4.45□□□□□ -1.7
HOXA9-204ENST00000487384 H7C2G1 150 aa4.44□□□□□ -1.7
HOXA9-204ENST00000487384 JOSD1Q15040 202 aaPredicted RBP4.44□□□□□ -1.7
HOXA9-204ENST00000487384 S100A7L2Q5SY68 101 aa4.44□□□□□ -1.7
HOXA9-204ENST00000487384 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
HOXA9-204ENST00000487384 C18orf32Q8TCD1 76 aa4.44□□□□□ -1.7
HOXA9-204ENST00000487384 TRAV23DV6A0A075B6W5 121 aa4.43□□□□□ -1.7
HOXA9-204ENST00000487384 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
HOXA9-204ENST00000487384 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
HOXA9-204ENST00000487384 Q6Q795 121 aa4.43□□□□□ -1.7
HOXA9-204ENST00000487384 VPS25Q9BRG1 176 aa4.43□□□□□ -1.7
HOXA9-204ENST00000487384 SEC11CQ9BY50 192 aa4.43□□□□□ -1.7
HOXA9-204ENST00000487384 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
HOXA9-204ENST00000487384 HSBP1O75506 76 aa4.42□□□□□ -1.7
HOXA9-204ENST00000487384 IFITM2Q01629 132 aa4.42□□□□□ -1.7
HOXA9-204ENST00000487384 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
HOXA9-204ENST00000487384 ZNF73O43830 326 aaPredicted RBP4.41□□□□□ -1.7
HOXA9-204ENST00000487384 TSPEAR-AS2P59090 65 aa4.41□□□□□ -1.7
HOXA9-204ENST00000487384 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
HOXA9-204ENST00000487384 RPS10P5Q9NQ39 176 aa4.41□□□□□ -1.7
HOXA9-204ENST00000487384 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
HOXA9-204ENST00000487384 TRAV12-1A0A0B4J245 112 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 NPC2P61916 151 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 Q1RN00 199 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 C1orf195Q5TG92 126 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 C14orf144Q96I85 54 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 LAMTOR3Q9UHA4 124 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 TRAPPC1Q9Y5R8 145 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 V9GYY9 64 aa4.4□□□□□ -1.71
HOXA9-204ENST00000487384 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
HOXA9-204ENST00000487384 SLC25A34Q6PIV7 304 aa4.39□□□□□ -1.71
HOXA9-204ENST00000487384 UQCC3Q6UW78 93 aa4.39□□□□□ -1.71
HOXA9-204ENST00000487384 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
HOXA9-204ENST00000487384 TMEM218A2RU14 115 aa4.38□□□□□ -1.71
HOXA9-204ENST00000487384 SPRR1BP22528 89 aa4.38□□□□□ -1.71
HOXA9-204ENST00000487384 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
HOXA9-204ENST00000487384 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
HOXA9-204ENST00000487384 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
HOXA9-204ENST00000487384 NDUFC2O95298 119 aa4.37□□□□□ -1.71
HOXA9-204ENST00000487384 CFC1P0CG37 223 aa4.37□□□□□ -1.71
HOXA9-204ENST00000487384 CD164Q04900 197 aa4.37□□□□□ -1.71
HOXA9-204ENST00000487384 COMMD7Q86VX2 200 aa4.37□□□□□ -1.71
HOXA9-204ENST00000487384 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
HOXA9-204ENST00000487384 LEPROTO15243 131 aa4.36□□□□□ -1.71
HOXA9-204ENST00000487384 TAL2Q16559 108 aa4.36□□□□□ -1.71
HOXA9-204ENST00000487384 PRO1933Q9H354 126 aa4.36□□□□□ -1.71
HOXA9-204ENST00000487384 J3QQQ9 107 aa4.35□□□□□ -1.71
HOXA9-204ENST00000487384 SMIM29Q86T20 159 aa4.35□□□□□ -1.71
HOXA9-204ENST00000487384 OR13C6PQ8NH95 151 aa4.35□□□□□ -1.71
HOXA9-204ENST00000487384 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
HOXA9-204ENST00000487384 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
HOXA9-204ENST00000487384 ADAMTSL4-AS1Q5T5F5 129 aa4.34□□□□□ -1.71
HOXA9-204ENST00000487384 Q5XG85 94 aa4.34□□□□□ -1.71
HOXA9-204ENST00000487384 LGALS3P17931 250 aaKnown RBP4.33□□□□□ -1.72
HOXA9-204ENST00000487384 RHEBQ15382 184 aa4.33□□□□□ -1.72
HOXA9-204ENST00000487384 CHCHD1Q96BP2 118 aaKnown RBP4.33□□□□□ -1.72
HOXA9-204ENST00000487384 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
HOXA9-204ENST00000487384 TEX49A0A1B0GTD5 131 aa4.32□□□□□ -1.72
HOXA9-204ENST00000487384 K7ERU9 68 aa4.32□□□□□ -1.72
HOXA9-204ENST00000487384 COX7BP24311 80 aa4.32□□□□□ -1.72
HOXA9-204ENST00000487384 NMUP48645 174 aa4.32□□□□□ -1.72
HOXA9-204ENST00000487384 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
HOXA9-204ENST00000487384 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
HOXA9-204ENST00000487384 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms