RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 Q8NDZ9 215 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 COPS9Q8WXC6 57 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 CBY1Q9Y3M2 126 aa6□□□□□ -1.45
CPSF4-213ENST00000484112 RPL13AP40429 203 aaKnown RBP5.99□□□□□ -1.45
CPSF4-213ENST00000484112 BVES-AS1Q5T3Y7 98 aa5.99□□□□□ -1.45
CPSF4-213ENST00000484112 Q6ZVH6 145 aa5.99□□□□□ -1.45
CPSF4-213ENST00000484112 TMEM238C9JI98 176 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 SPRR1AP35321 89 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 HINT1P49773 126 aaPredicted RBP5.98□□□□□ -1.45
CPSF4-213ENST00000484112 TAL2Q16559 108 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 LINC00337Q8N6G1 96 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 DAND5Q8N907 189 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 LITAFQ99732 161 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 SPANXCQ9NY87 97 aa5.98□□□□□ -1.45
CPSF4-213ENST00000484112 NCR3O14931 201 aa5.97□□□□□ -1.45
CPSF4-213ENST00000484112 ADAMTSL4-AS1Q5T5F5 129 aa5.97□□□□□ -1.45
CPSF4-213ENST00000484112 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
CPSF4-213ENST00000484112 FAM19A1Q7Z5A9 133 aa5.97□□□□□ -1.45
CPSF4-213ENST00000484112 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
CPSF4-213ENST00000484112 IFITM1P13164 125 aa5.96□□□□□ -1.46
CPSF4-213ENST00000484112 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
CPSF4-213ENST00000484112 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
CPSF4-213ENST00000484112 TTTY13Q9BZ97 58 aa5.96□□□□□ -1.46
CPSF4-213ENST00000484112 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
CPSF4-213ENST00000484112 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
CPSF4-213ENST00000484112 BATFQ16520 125 aa5.95□□□□□ -1.46
CPSF4-213ENST00000484112 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
CPSF4-213ENST00000484112 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
CPSF4-213ENST00000484112 A0A1B0GV90 55 aa5.94□□□□□ -1.46
CPSF4-213ENST00000484112 ETDCA0A1B0GVM5 59 aa5.94□□□□□ -1.46
CPSF4-213ENST00000484112 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-213ENST00000484112 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
CPSF4-213ENST00000484112 A6NDN8 102 aa5.93□□□□□ -1.46
CPSF4-213ENST00000484112 CRYGAP11844 174 aa5.93□□□□□ -1.46
CPSF4-213ENST00000484112 PRLHP81277 87 aa5.93□□□□□ -1.46
CPSF4-213ENST00000484112 CEND1Q8N111 149 aa5.93□□□□□ -1.46
CPSF4-213ENST00000484112 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
CPSF4-213ENST00000484112 MUC2Q02817 5179 aa5.92□□□□□ -1.46
CPSF4-213ENST00000484112 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
CPSF4-213ENST00000484112 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
CPSF4-213ENST00000484112 EIF4EBP3O60516 100 aaPredicted RBP5.91□□□□□ -1.46
CPSF4-213ENST00000484112 TSPAN13O95857 204 aa5.91□□□□□ -1.46
CPSF4-213ENST00000484112 NPC2P61916 151 aa5.91□□□□□ -1.46
CPSF4-213ENST00000484112 HIGD2AQ9BW72 106 aa5.91□□□□□ -1.46
CPSF4-213ENST00000484112 A0A1B0GWB2 263 aa5.9□□□□□ -1.46
CPSF4-213ENST00000484112 B5MCH6 92 aa5.9□□□□□ -1.46
CPSF4-213ENST00000484112 ZNF73O43830 326 aaPredicted RBP5.9□□□□□ -1.46
CPSF4-213ENST00000484112 FXYD2P54710 66 aa5.9□□□□□ -1.46
CPSF4-213ENST00000484112 Q6ZRX8 168 aa5.9□□□□□ -1.46
CPSF4-213ENST00000484112 HIST1H4GQ99525 98 aa5.9□□□□□ -1.46
CPSF4-213ENST00000484112 TMEM238LA0A1B0GVL6 79 aa5.88□□□□□ -1.47
CPSF4-213ENST00000484112 A6NJY4 79 aa5.88□□□□□ -1.47
CPSF4-213ENST00000484112 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
CPSF4-213ENST00000484112 TYMSOSQ8TAI1 123 aa5.88□□□□□ -1.47
CPSF4-213ENST00000484112 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
CPSF4-213ENST00000484112 A0A087X002 238 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 TRBV7-6A0A0J9YX20 115 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 C9orf118A6NHY6 69 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 MUSTN1Q8IVN3 82 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
CPSF4-213ENST00000484112 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
CPSF4-213ENST00000484112 Q9BRP9 147 aa5.85□□□□□ -1.47
CPSF4-213ENST00000484112 DHRS4-AS1Q9P1J3 65 aa5.85□□□□□ -1.47
CPSF4-213ENST00000484112 A4D1N5 150 aa5.84□□□□□ -1.47
CPSF4-213ENST00000484112 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.47
CPSF4-213ENST00000484112 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
CPSF4-213ENST00000484112 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
CPSF4-213ENST00000484112 ELOF1P60002 83 aaKnown RBP5.83□□□□□ -1.48
CPSF4-213ENST00000484112 SPAG11AQ6PDA7 123 aa5.83□□□□□ -1.48
CPSF4-213ENST00000484112 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
CPSF4-213ENST00000484112 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
CPSF4-213ENST00000484112 A0A0B4J2C4 111 aa5.82□□□□□ -1.48
CPSF4-213ENST00000484112 COX7BP24311 80 aa5.82□□□□□ -1.48
CPSF4-213ENST00000484112 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
CPSF4-213ENST00000484112 C6orf99Q4VX62 202 aa5.82□□□□□ -1.48
CPSF4-213ENST00000484112 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 H3BUT2 72 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 K7ERJ3 54 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 CFC1P0CG37 223 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 VAMP3Q15836 100 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 LINC00304Q8N9R0 145 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
CPSF4-213ENST00000484112 ERC2-IT1O76042 136 aa5.8□□□□□ -1.48
CPSF4-213ENST00000484112 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
CPSF4-213ENST00000484112 RAB37Q96AX2 223 aa5.8□□□□□ -1.48
CPSF4-213ENST00000484112 K7EP34 96 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 FABP2P12104 132 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 SPRR1BP22528 89 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 GTF2H5Q6ZYL4 71 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
CPSF4-213ENST00000484112 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
CPSF4-213ENST00000484112 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms