RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 LCE6AA0A183 80 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 PRH1P02810 166 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 KRTAP2-3P0C7H8 128 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 LINC00158P58513 81 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 KRTAP2-4Q9BYR9 128 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 KRTAP2-1Q9BYU5 128 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 ANKRD50Q9ULJ7 1429 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 INO80Q9ULG1 1556 aaPredicted RBP0.52□□□□□ -2.33
ALMS1-203ENST00000476650 DDX60LQ5H9U9 1706 aaKnown RBP0.52□□□□□ -2.33
ALMS1-203ENST00000476650 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 PTPRQQ9UMZ3 2332 aa0.52□□□□□ -2.33
ALMS1-203ENST00000476650 POLQO75417 2590 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 HFM1A2PYH4 1435 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 LINC01549A6NIU2 74 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 NESP48681 1621 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 RALGAPBQ86X10 1494 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
ALMS1-203ENST00000476650 PARP4Q9UKK3 1724 aaKnown RBP0.51□□□□□ -2.33
ALMS1-203ENST00000476650 CCDC180Q9P1Z9 1646 aa0.5□□□□□ -2.33
ALMS1-203ENST00000476650 FCER1GP30273 86 aa0.5□□□□□ -2.33
ALMS1-203ENST00000476650 SMR3AQ99954 134 aa0.5□□□□□ -2.33
ALMS1-203ENST00000476650 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
ALMS1-203ENST00000476650 ZNF469Q96JG9 3925 aaPredicted RBP0.5□□□□□ -2.33
ALMS1-203ENST00000476650 EIF2AK4Q9P2K8 1649 aaKnown RBP0.49□□□□□ -2.33
ALMS1-203ENST00000476650 TNCP24821 2201 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 ABCA12Q86UK0 2595 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 SMIM5Q71RC9 77 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 U3KQA8 63 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 C4AP0C0L4 1744 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 C4BP0C0L5 1744 aa0.49□□□□□ -2.33
ALMS1-203ENST00000476650 F8P00451 2351 aa0.48□□□□□ -2.33
ALMS1-203ENST00000476650 MRPL33O75394 65 aaKnown RBP0.48□□□□□ -2.33
ALMS1-203ENST00000476650 CICQ96RK0 1608 aaPredicted RBP0.48□□□□□ -2.33
ALMS1-203ENST00000476650 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
ALMS1-203ENST00000476650 TJP1Q07157 1748 aa0.47□□□□□ -2.33
ALMS1-203ENST00000476650 NHSQ6T4R5 1651 aa0.47□□□□□ -2.33
ALMS1-203ENST00000476650 ETDCA0A1B0GVM5 59 aa0.47□□□□□ -2.33
ALMS1-203ENST00000476650 CRIP1P50238 77 aa0.47□□□□□ -2.33
ALMS1-203ENST00000476650 COX6B2Q6YFQ2 88 aa0.47□□□□□ -2.33
ALMS1-203ENST00000476650 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
ALMS1-203ENST00000476650 K7EMI3 77 aa0.46□□□□□ -2.34
ALMS1-203ENST00000476650 KCNQ1DNQ9H478 68 aa0.46□□□□□ -2.34
ALMS1-203ENST00000476650 ANK2Q01484 3957 aa0.46□□□□□ -2.34
ALMS1-203ENST00000476650 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.46□□□□□ -2.344e-9■■■□□ 19
ALMS1-203ENST00000476650 DEFB131BA0A096LNP1 70 aa0.45□□□□□ -2.34
ALMS1-203ENST00000476650 NCBP2-AS2Q69YL0 99 aa0.45□□□□□ -2.34
ALMS1-203ENST00000476650 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
ALMS1-203ENST00000476650 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 OTOGQ6ZRI0 2925 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 H0YAA0 97 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 M0R1W7 72 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 ABCA6Q8N139 1617 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 PKDREJQ9NTG1 2253 aa0.44□□□□□ -2.34
ALMS1-203ENST00000476650 SPTBN1Q01082 2364 aaKnown RBP0.43□□□□□ -2.34
ALMS1-203ENST00000476650 IAPPP10997 89 aa0.43□□□□□ -2.34
ALMS1-203ENST00000476650 DEFB130BP0DP73 79 aa0.42□□□□□ -2.34
ALMS1-203ENST00000476650 DEFB130AP0DP74 79 aa0.42□□□□□ -2.34
ALMS1-203ENST00000476650 ABCC6O95255 1503 aa0.42□□□□□ -2.34
ALMS1-203ENST00000476650 CPS1P31327 1500 aa0.42□□□□□ -2.34
ALMS1-203ENST00000476650 GLI2P10070 1586 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 UGGT1Q9NYU2 1555 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 DEFB135Q30KP9 77 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 MINOS1Q5TGZ0 78 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 PRXQ9BXM0 1461 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 AKAP6Q13023 2319 aa0.41□□□□□ -2.34
ALMS1-203ENST00000476650 TIAM1Q13009 1591 aa0.4□□□□□ -2.34
ALMS1-203ENST00000476650 EEA1Q15075 1411 aa0.4□□□□□ -2.34
ALMS1-203ENST00000476650 M0R2T5 61 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 NMES1Q9C002 83 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 TENM4Q6N022 2769 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 CNOT1A5YKK6 2376 aaKnown RBP0.4□□□□□ -2.35
ALMS1-203ENST00000476650 VWFP04275 2813 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 IGF2RP11717 2491 aa0.4□□□□□ -2.35
ALMS1-203ENST00000476650 H0YGG7 62 aa0.39□□□□□ -2.35
ALMS1-203ENST00000476650 GVINP1Q7Z2Y8 2422 aa0.39□□□□□ -2.35
ALMS1-203ENST00000476650 C3P01024 1663 aa0.39□□□□□ -2.35
ALMS1-203ENST00000476650 NCOR1O75376 2440 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 ALS2Q96Q42 1657 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 PLXNC1O60486 1568 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 PRM1P04553 51 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 DEFB114Q30KQ6 69 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 DEPDC5O75140 1603 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 RNF17Q9BXT8 1623 aaKnown RBP0.38□□□□□ -2.35
ALMS1-203ENST00000476650 ABCA10Q8WWZ4 1543 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 KIAA0586Q9BVV6 1533 aa0.38□□□□□ -2.35
ALMS1-203ENST00000476650 LYNX1G3V0Z9 82 aa0.37□□□□□ -2.35
ALMS1-203ENST00000476650 SERF2P84101 59 aa0.37□□□□□ -2.35
ALMS1-203ENST00000476650 UNC79Q9P2D8 2635 aa0.37□□□□□ -2.35
ALMS1-203ENST00000476650 ZFYVE26Q68DK2 2539 aa0.37□□□□□ -2.35
ALMS1-203ENST00000476650 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
ALMS1-203ENST00000476650 TRANK1O15050 2925 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 CHD6Q8TD26 2715 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 C6orf48Q9UBA6 75 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 REV3LO60673 3130 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 MROH2AA6NES4 1674 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 ITSN2Q9NZM3 1697 aa0.36□□□□□ -2.35
ALMS1-203ENST00000476650 THOC2Q8NI27 1593 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms