RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	ARHGEF5	Q12774	1597 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	DIP2A	Q14689	1571 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	LRP6	O75581	1613 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	NES	P48681	1621 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCA9	Q8IUA7	1624 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	FBN2	P35556	2912 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	PDE4DIP	Q5VU43	2346 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	KNL1	Q8NG31	2342 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	RGPD1	P0DJD0	1748 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	DDX60L	Q5H9U9	1706 aa	Known RBP	0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	C2CD3	Q4AC94	2353 aa		0.3	□□□□□ -2.36
HDAC9-222	ENST00000474742	ARFGEF2	Q9Y6D5	1785 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	SPTA1	P02549	2419 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	FANCD2	Q9BXW9	1451 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	PLXNB2	O15031	1838 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	SYNE2	Q8WXH0	6885 aa	Known RBP	0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	AGL	P35573	1532 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	NWD1	Q149M9	1564 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	CDC42BPG	Q6DT37	1551 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	KMT2D	O14686	5537 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	TMEM131L	A2VDJ0	1609 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	LAMC1	P11047	1609 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	PREX2	Q70Z35	1606 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCA6	Q8N139	1617 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	ADCY10	Q96PN6	1610 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	CIC	Q96RK0	1608 aa	Predicted RBP	0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742		K7EIL1	84 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	NDUFA3	O95167	84 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	SPINK6	Q6UWN8	80 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	LINC00472	Q9H8W2	130 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	NOP10	Q9NPE3	64 aa	Known RBP	0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	CACNA1H	O95180	2353 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	TPR	P12270	2363 aa	Known RBP	0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	PTPN13	Q12923	2485 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	RICTOR	Q6R327	1708 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	UBR1	Q8IWV7	1749 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	PIEZO1	Q92508	2521 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	ANKRD36C	Q5JPF3	1778 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCA12	Q86UK0	2595 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	TENM3	Q9P273	2699 aa		0.29	□□□□□ -2.36
HDAC9-222	ENST00000474742	KIAA0586	Q9BVV6	1533 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	CREBBP	Q92793	2442 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCC8	Q09428	1581 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	IQGAP2	Q13576	1575 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCA5	Q8WWZ7	1642 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	RNF17	Q9BXT8	1623 aa	Known RBP	0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	NOTCH1	P46531	2555 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	WIZ	O95785	1651 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	C3	P01024	1663 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	KIF1A	Q12756	1690 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	ALS2	Q96Q42	1657 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	DST	Q03001	7570 aa	Known RBP	0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	QSER1	Q2KHR3	1735 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	NRAP	Q86VF7	1730 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	USF3	Q68DE3	2245 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	PAPPA2	Q9BXP8	1791 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	PRB1	P04280	392 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	IAPP	P10997	89 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	SPRR1B	P22528	89 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	H1FX-AS1	Q4G0G2	97 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742		Q5VSD8	79 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	KRTAP5-10	Q6L8G5	202 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	WFDC13	Q8IUB5	93 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	DEFB123	Q8N688	67 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	LINC00308	Q8TCZ7	52 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	SMIM2	Q9BVW6	85 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	PLAC8	Q9NZF1	115 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	PCNX1	Q96RV3	2341 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	TSC2	P49815	1807 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	ABCA2	Q9BZC7	2435 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	ZNF462	Q96JM2	2506 aa		0.28	□□□□□ -2.36
HDAC9-222	ENST00000474742	CD163L1	Q9NR16	1453 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	SLIT1	O75093	1534 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	TRPM2	O94759	1503 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	TOP2A	P11388	1531 aa	Known RBP	0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	EFCAB6	Q5THR3	1501 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	CLASP1	Q7Z460	1538 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	PIEZO2	Q9H5I5	2752 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	SSC5D	A1L4H1	1573 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	MAST1	Q9Y2H9	1570 aa		0.28	□□□□□ -2.37
HDAC9-222	ENST00000474742	DEPDC5	O75140	1603 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	NHSL1	Q5SYE7	1610 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	MROH2A	A6NES4	1674 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	COL4A6	Q14031	1691 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	ZNF831	Q5JPB2	1677 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	POLR1A	O95602	1720 aa	Predicted RBP	0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	TTC28	Q96AY4	2481 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	ZNF292	O60281	2723 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	LCE6A	A0A183	80 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	C10orf142	B7Z368	130 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	LYNX1	G3V0Z9	82 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742		I3L2K1	104 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	SPRR1A	P35321	89 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	DEFB131A	P59861	70 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	PRLH	P81277	87 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	PRB3	Q04118	309 aa	Predicted RBP	0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	KLK9	Q2XQG4	91 aa		0.27	□□□□□ -2.37
HDAC9-222	ENST00000474742	DEFB135	Q30KP9	77 aa		0.27	□□□□□ -2.37

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